Variant report

Variant	rs11031801
Chromosome Location	chr11:32486192-32486193
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32460248..32463699-chr11:32486018..32490383,4	K562	blood:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10219285	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11031799	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11031800	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11031813	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12271863	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12272661	1.00[ASN][1000 genomes]
rs12276814	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12277550	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12282084	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12789194	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12789525	0.83[EUR][1000 genomes]
rs12790633	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12794418	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12798270	0.86[EUR][1000 genomes]
rs12805730	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12808723	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17748371	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35128594	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35245711	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6508	0.82[JPT][hapmap]
rs7105964	1.00[JPT][hapmap]
rs7113208	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7115617	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7118228	0.86[EUR][1000 genomes]
rs71466594	1.00[ASN][1000 genomes]
rs9300011	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9300012	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9300013	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9651595	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832108	chr11:32395937-32560583	Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	esv2753303	chr11:32447324-32494924	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32469000-32487800	Weak transcription	Ovary	ovary
2	chr11:32475200-32487600	Weak transcription	Fetal Kidney	kidney

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