Variant report

Variant	rs11031967
Chromosome Location	chr11:32783736-32783737
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10835980	0.89[ASN][1000 genomes]
rs11031895	0.81[ASN][1000 genomes]
rs11031896	0.81[ASN][1000 genomes]
rs11031902	1.00[JPT][hapmap]
rs11031911	1.00[JPT][hapmap]
rs11031953	1.00[JPT][hapmap]
rs11031968	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11031974	0.83[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs11031993	0.89[ASN][1000 genomes]
rs11032011	0.89[ASN][1000 genomes]
rs11820154	0.89[ASN][1000 genomes]
rs11827537	0.86[ASN][1000 genomes]
rs12363452	0.92[ASN][1000 genomes]
rs12363973	0.89[ASN][1000 genomes]
rs12366254	1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12574799	0.83[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs12787879	0.87[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs12796379	0.87[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs12802087	0.81[ASN][1000 genomes]
rs1352177	0.92[ASN][1000 genomes]
rs1352178	0.92[ASN][1000 genomes]
rs17251664	0.89[ASN][1000 genomes]
rs17329869	0.87[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs2087085	0.81[ASN][1000 genomes]
rs33992831	0.81[ASN][1000 genomes]
rs34370631	0.87[ASN][1000 genomes]
rs35733667	0.87[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs4267044	0.81[ASN][1000 genomes]
rs4756174	0.92[ASN][1000 genomes]
rs58910879	0.89[ASN][1000 genomes]
rs61889448	0.81[ASN][1000 genomes]
rs7115208	1.00[JPT][hapmap]
rs7121691	0.87[ASN][1000 genomes]
rs7129747	0.81[ASN][1000 genomes]
rs7130509	0.81[ASN][1000 genomes]
rs7130754	1.00[JPT][hapmap];0.84[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs7933005	1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7942369	1.00[JPT][hapmap];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9667005	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9734816	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9736074	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832109	chr11:32661314-32830549	Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2758262	chr11:32714643-33049940	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
3	esv2759815	chr11:32714643-33049940	Flanking Active TSS Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32777800-32790200	Weak transcription	Liver	Liver

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