Variant report

Variant	rs11031896
Chromosome Location	chr11:32630477-32630478
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32628200..32630785-chr11:32636529..32638264,2	K562	blood:

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10835948	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10835980	0.91[ASN][1000 genomes]
rs11031885	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11031895	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11031967	0.81[ASN][1000 genomes]
rs11031968	0.81[ASN][1000 genomes]
rs11031974	0.94[ASN][1000 genomes]
rs11031993	0.91[ASN][1000 genomes]
rs11032011	0.91[ASN][1000 genomes]
rs11827537	0.88[ASN][1000 genomes]
rs12363452	0.89[ASN][1000 genomes]
rs12363973	0.91[ASN][1000 genomes]
rs12366254	0.89[ASN][1000 genomes]
rs12574799	0.91[ASN][1000 genomes]
rs12787879	0.89[ASN][1000 genomes]
rs12791629	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12796379	0.89[ASN][1000 genomes]
rs12802087	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1352177	0.89[ASN][1000 genomes]
rs1352178	0.89[ASN][1000 genomes]
rs17251664	0.91[ASN][1000 genomes]
rs17327768	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17329869	0.91[ASN][1000 genomes]
rs2087085	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs33992831	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34370631	0.87[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs34682467	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs35733667	0.91[ASN][1000 genomes]
rs4267044	0.82[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4756174	0.89[ASN][1000 genomes]
rs61889448	0.82[AFR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7108031	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7113466	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7121691	0.89[ASN][1000 genomes]
rs7129747	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7130509	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7130754	0.86[ASN][1000 genomes]
rs7933005	0.84[ASN][1000 genomes]
rs7934364	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7942369	0.81[ASN][1000 genomes]
rs9667005	0.81[ASN][1000 genomes]
rs9734816	0.81[ASN][1000 genomes]

No data

Chromatin state (count:41 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32616800-32631000	Weak transcription	HSMMtube	muscle
2	chr11:32617000-32632000	Weak transcription	Gastric	stomach
3	chr11:32621000-32631600	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:32621000-32631600	Weak transcription	Psoas Muscle	Psoas
5	chr11:32625400-32637200	Weak transcription	Fetal Heart	heart
6	chr11:32625800-32634800	Weak transcription	HepG2	liver
7	chr11:32626000-32631600	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr11:32626200-32630800	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr11:32626200-32631800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr11:32626600-32632400	Weak transcription	Fetal Kidney	kidney
11	chr11:32627200-32631600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr11:32627200-32635000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
13	chr11:32627400-32630800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
14	chr11:32627400-32630800	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr11:32627400-32631000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
16	chr11:32627400-32631200	Weak transcription	Primary T cells from cord blood	blood
17	chr11:32627600-32630800	Weak transcription	Primary neutrophils fromperipheralblood	blood
18	chr11:32627800-32631600	Weak transcription	Primary T helper cells PMA-I stimulated	--
19	chr11:32628000-32630600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr11:32628200-32631000	Weak transcription	Primary T helper cells fromperipheralblood	blood
21	chr11:32628200-32631000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
22	chr11:32628200-32631600	Weak transcription	Duodenum Mucosa	Duodenum
23	chr11:32628200-32632600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr11:32628200-32635000	Weak transcription	Liver	Liver
25	chr11:32628200-32635400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
26	chr11:32629000-32630600	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
27	chr11:32629200-32630800	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr11:32629400-32630600	ZNF genes & repeats	Fetal Intestine Small	intestine
29	chr11:32629400-32635200	Weak transcription	Fetal Lung	lung
30	chr11:32629600-32631400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr11:32629600-32632400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr11:32629800-32630600	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr11:32629800-32630600	ZNF genes & repeats	Fetal Muscle Leg	muscle
34	chr11:32629800-32630600	ZNF genes & repeats	Fetal Stomach	stomach
35	chr11:32630000-32630600	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr11:32630000-32630600	ZNF genes & repeats	Fetal Brain Female	brain
37	chr11:32630200-32630600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr11:32630200-32631800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr11:32630200-32631800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
40	chr11:32630400-32630800	Strong transcription	A549	lung
41	chr11:32630400-32632200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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