Variant report

Variant	rs7934364
Chromosome Location	chr11:32602784-32602785
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:28)
CpG islands
(count:0)
Chromatin interactive
region (count:1)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:28 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOXA2	chr11:32602487-32603005	A549	lung:	n/a	n/a
2	FOXA1	chr11:32602501-32602849	HepG2	liver:	n/a	n/a
3	FOSL2	chr11:32602487-32602839	HepG2	liver:	n/a	n/a
4	CEBPB	chr11:32602505-32602868	HepG2	liver:	n/a	n/a
5	FOXA2	chr11:32602441-32602824	HepG2	liver:	n/a	n/a
6	TEAD4	chr11:32602452-32602919	HepG2	liver:	n/a	n/a
7	CEBPB	chr11:32602556-32602812	Hela-S3	cervix:	n/a	n/a
8	CEBPB	chr11:32602558-32602911	MCF-7	breast:	n/a	n/a
9	FOS	chr11:32602525-32602820	MCF10A-Er-Src	breast:	n/a	n/a
10	CEBPB	chr11:32602524-32602874	IMR90	lung:	n/a	n/a
11	FOS	chr11:32602521-32602845	MCF10A-Er-Src	breast:	n/a	n/a
12	CEBPB	chr11:32602380-32602951	A549	lung:	n/a	n/a
13	FOXA1	chr11:32602435-32602906	HepG2	liver:	n/a	n/a
14	CEBPB	chr11:32602474-32602829	HepG2	liver:	n/a	n/a
15	MYC	chr11:32602410-32602819	MCF10A-Er-Src	breast:	n/a	n/a
16	FOS	chr11:32602499-32602848	MCF10A-Er-Src	breast:	n/a	n/a
17	FOXA1	chr11:32602457-32602882	HepG2	liver:	n/a	n/a
18	CEBPB	chr11:32602545-32602862	A549	lung:	n/a	n/a
19	FOXA2	chr11:32602430-32603139	A549	lung:	n/a	n/a
20	SP1	chr11:32602404-32602920	A549	lung:	n/a	n/a
21	CEBPB	chr11:32602529-32602942	A549	lung:	n/a	n/a
22	FOSL2	chr11:32602447-32602862	A549	lung:	n/a	n/a
23	SIN3AK20	chr11:32602610-32602890	PFSK-1	brain:	n/a	n/a
24	POLR2A	chr11:32602613-32603020	PFSK-1	brain:	n/a	n/a
25	FOXA1	chr11:32602332-32602863	HepG2	liver:	n/a	n/a
26	MYC	chr11:32602644-32602844	MCF10A-Er-Src	breast:	n/a	n/a
27	FOS	chr11:32602547-32602855	MCF10A-Er-Src	breast:	n/a	n/a
28	STAT3	chr11:32602707-32602859	MCF10A-Er-Src	breast:	n/a	n/a

No data

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32599748..32604204-chr11:32604276..32608693,5	MCF-7	breast:

No data

Variant related genes	Relation type
EIF3M	TF binding region
ENSG00000149100	Chromatin interaction

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10835948	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10835957	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap]
rs11031885	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11031895	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11031896	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11031902	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs11031911	1.00[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap]
rs11031953	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs11031974	0.91[ASN][1000 genomes]
rs11031993	0.88[ASN][1000 genomes]
rs12363452	0.86[ASN][1000 genomes]
rs12366254	1.00[CHB][hapmap];0.82[JPT][hapmap];0.86[ASN][1000 genomes]
rs12574799	0.88[ASN][1000 genomes]
rs12787879	1.00[CHB][hapmap];0.86[YRI][hapmap];0.86[ASN][1000 genomes]
rs12791629	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12796379	0.86[ASN][1000 genomes]
rs12801320	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs12802087	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1352177	0.86[ASN][1000 genomes]
rs1352178	0.86[ASN][1000 genomes]
rs17251664	0.88[ASN][1000 genomes]
rs17327768	1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17329869	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.88[ASN][1000 genomes]
rs201842	0.92[YRI][hapmap]
rs2087085	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.97[ASN][1000 genomes]
rs33992831	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34370631	0.81[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs34682467	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35733667	0.88[ASN][1000 genomes]
rs4267044	0.97[ASN][1000 genomes]
rs4756174	0.86[ASN][1000 genomes]
rs61889448	0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7108031	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7113466	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7115208	1.00[CHB][hapmap];0.82[JPT][hapmap]
rs7121691	0.86[ASN][1000 genomes]
rs7129747	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7130509	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7130754	1.00[CHB][hapmap];0.82[JPT][hapmap];1.00[YRI][hapmap];0.83[ASN][1000 genomes]
rs7933005	1.00[CHB][hapmap];0.82[JPT][hapmap];0.81[ASN][1000 genomes]
rs7949244	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs9736074	1.00[CHB][hapmap];0.82[JPT][hapmap]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32597400-32604200	Weak transcription	K562	blood
2	chr11:32602200-32603600	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr11:32602400-32602800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr11:32602400-32603000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
5	chr11:32602400-32603400	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr11:32602400-32603800	Enhancers	A549	lung
7	chr11:32602600-32603000	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr11:32602600-32603000	Flanking Active TSS	HepG2	liver
9	chr11:32602600-32603400	Enhancers	Dnd41	blood

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