The 2.0 version of rSNPBase

Variant report

Variant rs11038745
Chromosome Location chr11:46047864-46047865
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46001400-46070400 Weak transcription Primary hematopoietic stem cells blood
2 chr11:46002000-46056200 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr11:46012800-46062800 Weak transcription GM12878-XiMat blood
4 chr11:46016200-46048200 Weak transcription Esophagus oesophagus
5 chr11:46022000-46074600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr11:46023400-46048200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr11:46025600-46056200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr11:46026200-46055600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr11:46031400-46048400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr11:46032400-46048400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr11:46032600-46052800 Weak transcription Fetal Lung lung
12 chr11:46034200-46049000 Weak transcription Fetal Kidney kidney
13 chr11:46034400-46048200 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr11:46034400-46056000 Weak transcription Primary B cells from cord blood blood
15 chr11:46034800-46061800 Weak transcription Primary T cells fromperipheralblood blood
16 chr11:46035200-46048000 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr11:46035200-46048200 Weak transcription H1 Cell Line embryonic stem cell
18 chr11:46035200-46048200 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr11:46035200-46048400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr11:46035200-46061800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr11:46035200-46062000 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr11:46035400-46048400 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr11:46035400-46060800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr11:46035800-46048200 Weak transcription H9 Cell Line embryonic stem cell
25 chr11:46038800-46053400 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr11:46039200-46077200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr11:46039400-46096800 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr11:46040200-46048000 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr11:46040200-46048000 Weak transcription Placenta Amnion Placenta Amnion
30 chr11:46040200-46048600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr11:46041000-46061400 Weak transcription Adipose Nuclei Adipose
32 chr11:46041000-46066200 Weak transcription Liver Liver
33 chr11:46041000-46071000 Weak transcription Placenta Placenta
34 chr11:46041200-46048200 Weak transcription Fetal Muscle Leg muscle
35 chr11:46041200-46051200 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr11:46041200-46070800 Weak transcription Thymus Thymus
37 chr11:46041400-46048200 Weak transcription Left Ventricle heart
38 chr11:46041400-46086600 Weak transcription Fetal Intestine Large intestine
39 chr11:46041600-46048200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr11:46042000-46048000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr11:46042000-46048200 Weak transcription Brain Anterior Caudate brain
42 chr11:46042000-46061600 Weak transcription Brain Inferior Temporal Lobe brain
43 chr11:46042000-46061600 Weak transcription Ovary ovary
44 chr11:46042000-46065000 Weak transcription Pancreas Pancrea
45 chr11:46042000-46071000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr11:46042000-46071000 Weak transcription Brain Angular Gyrus brain
47 chr11:46042200-46048400 Weak transcription Brain Cingulate Gyrus brain
48 chr11:46042400-46052800 Weak transcription Brain Hippocampus Middle brain
49 chr11:46043200-46048400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr11:46043200-46048400 Weak transcription Osteobl bone

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Last update: Aug 31, 2015