Variant report

Variant rs2945997
Chromosome Location chr11:45977339-45977340
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:45952400-45996200 Weak transcription Stomach Mucosa stomach
2 chr11:45953000-45988600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr11:45954000-45978800 Strong transcription Primary neutrophils fromperipheralblood blood
4 chr11:45957200-46004400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr11:45957200-46004400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr11:45957600-45986400 Weak transcription HMEC breast
7 chr11:45957800-45986400 Weak transcription NHEK skin
8 chr11:45958600-45979000 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr11:45958800-45979000 Strong transcription Primary monocytes fromperipheralblood blood
10 chr11:45960400-45986600 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr11:45962000-45978800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
12 chr11:45962200-45978400 Strong transcription Primary T cells from cord blood blood
13 chr11:45962600-45979200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr11:45963000-45977400 Strong transcription Primary B cells from cord blood blood
15 chr11:45963200-45977600 Strong transcription Duodenum Smooth Muscle Duodenum
16 chr11:45966400-45979000 Strong transcription Primary B cells from peripheral blood blood
17 chr11:45967600-46004600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr11:45967800-45977600 Strong transcription Skeletal Muscle Female skeletal muscle
19 chr11:45968000-45985800 Weak transcription K562 blood
20 chr11:45969800-45983400 Weak transcription Fetal Heart heart
21 chr11:45970400-45985200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr11:45970600-45983400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr11:45970600-45986200 Weak transcription NHLF lung
24 chr11:45970600-45986600 Weak transcription Pancreas Pancrea
25 chr11:45970600-45986800 Weak transcription HepG2 liver
26 chr11:45970800-45983000 Weak transcription Fetal Brain Female brain
27 chr11:45970800-45989200 Weak transcription Placenta Amnion Placenta Amnion
28 chr11:45970800-45990400 Weak transcription NHDF-Ad bronchial
29 chr11:45971000-45977600 Strong transcription Fetal Adrenal Gland Adrenal Gland
30 chr11:45971000-45983400 Weak transcription Right Ventricle heart
31 chr11:45971000-45985800 Weak transcription Rectal Smooth Muscle rectum
32 chr11:45971000-45986800 Weak transcription Gastric stomach
33 chr11:45971000-45990000 Weak transcription Colonic Mucosa Colon
34 chr11:45971000-45990600 Weak transcription H9 Cell Line embryonic stem cell
35 chr11:45971000-45992400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr11:45971200-45985200 Weak transcription H1 Cell Line embryonic stem cell
37 chr11:45971200-45986600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr11:45971200-45989600 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr11:45971200-45992400 Weak transcription Small Intestine intestine
40 chr11:45971400-45981600 Weak transcription Fetal Kidney kidney
41 chr11:45971400-45990800 Weak transcription HUVEC blood vessel
42 chr11:45971600-45981000 Weak transcription A549 lung
43 chr11:45971600-45986600 Weak transcription Fetal Brain Male brain
44 chr11:45971800-45977400 Weak transcription Brain Germinal Matrix brain
45 chr11:45971800-45977600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr11:45971800-45991400 Weak transcription Primary T killer memory cells from peripheral blood blood
47 chr11:45972000-45977400 Weak transcription Thymus Thymus
48 chr11:45972000-45981000 Weak transcription Brain Anterior Caudate brain
49 chr11:45972000-45982000 Weak transcription Brain Angular Gyrus brain
50 chr11:45972000-45983200 Weak transcription Esophagus oesophagus

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