Variant report

Variant	rs11041900
Chromosome Location	chr11:8404216-8404217
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10769905	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10769906	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10840030	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10840031	0.84[ASN][1000 genomes]
rs10840038	0.89[ASN][1000 genomes]
rs10840040	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10840042	0.91[ASN][1000 genomes]
rs11041897	0.88[ASN][1000 genomes]
rs11041907	0.82[EUR][1000 genomes]
rs11041914	0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12289586	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2123990	0.85[ASN][1000 genomes]
rs2311391	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2311436	0.86[ASN][1000 genomes]
rs4304764	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55810520	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6578964	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7107739	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7108993	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7112477	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7118189	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7128727	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7129564	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs749263	0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7929500	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:8397600-8408200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr11:8398000-8408000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr11:8403000-8407200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr11:8403600-8405000	Enhancers	Esophagus	oesophagus
5	chr11:8403600-8407000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr11:8403600-8408000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr11:8403800-8404600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr11:8403800-8404800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr11:8403800-8405000	Enhancers	HSMM	muscle
10	chr11:8403800-8406200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr11:8404000-8404400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr11:8404000-8404600	Enhancers	NHEK	skin
13	chr11:8404000-8404800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr11:8404000-8404800	Enhancers	NH-A	brain
15	chr11:8404000-8404800	Enhancers	Osteobl	bone
16	chr11:8404200-8404600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr11:8404200-8404600	Enhancers	Placenta Amnion	Placenta Amnion
18	chr11:8404200-8405000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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