The 2.0 version of rSNPBase

Variant report

Variant rs11045369
Chromosome Location chr12:20803269-20803270
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:20766600-20805000 Strong transcription Hela-S3 cervix
2 chr12:20768000-20813600 Weak transcription Colonic Mucosa Colon
3 chr12:20774000-20810800 Weak transcription Placenta Placenta
4 chr12:20780400-20812800 Weak transcription Adipose Nuclei Adipose
5 chr12:20780600-20812800 Weak transcription Small Intestine intestine
6 chr12:20783000-20808200 Weak transcription Ovary ovary
7 chr12:20783000-20808400 Weak transcription Pancreas Pancrea
8 chr12:20783000-20812600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr12:20783200-20803400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr12:20784600-20810600 Weak transcription Brain Hippocampus Middle brain
11 chr12:20784800-20812600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr12:20784800-20816000 Weak transcription Osteobl bone
13 chr12:20785000-20809400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr12:20785600-20808400 Weak transcription Fetal Kidney kidney
15 chr12:20788000-20812400 Weak transcription Duodenum Mucosa Duodenum
16 chr12:20788200-20806800 Weak transcription Fetal Muscle Leg muscle
17 chr12:20788400-20806800 Weak transcription Aorta Aorta
18 chr12:20788400-20808200 Weak transcription Fetal Muscle Trunk muscle
19 chr12:20788400-20808200 Weak transcription Right Ventricle heart
20 chr12:20788600-20806400 Weak transcription Fetal Stomach stomach
21 chr12:20789400-20804000 Weak transcription Stomach Smooth Muscle stomach
22 chr12:20789600-20803400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr12:20799600-20806400 Weak transcription Colon Smooth Muscle Colon
24 chr12:20799600-20813000 Weak transcription Rectal Smooth Muscle rectum
25 chr12:20799800-20812600 Weak transcription A549 lung
26 chr12:20800000-20806800 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr12:20800000-20808200 Weak transcription Left Ventricle heart
28 chr12:20800200-20809600 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr12:20800200-20809800 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr12:20800200-20810200 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr12:20800200-20812800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr12:20800600-20809800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr12:20801200-20804600 Strong transcription HUVEC blood vessel
34 chr12:20801600-20804400 Strong transcription Fetal Intestine Large intestine
35 chr12:20801600-20804600 Strong transcription Rectal Mucosa Donor 31 rectum
36 chr12:20802200-20806800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr12:20802200-20812600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr12:20803000-20806400 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015