The 2.0 version of rSNPBase

Variant report

Variant rs73082641
Chromosome Location chr12:20806178-20806179
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:20768000-20813600 Weak transcription Colonic Mucosa Colon
2 chr12:20774000-20810800 Weak transcription Placenta Placenta
3 chr12:20780400-20812800 Weak transcription Adipose Nuclei Adipose
4 chr12:20780600-20812800 Weak transcription Small Intestine intestine
5 chr12:20783000-20808200 Weak transcription Ovary ovary
6 chr12:20783000-20808400 Weak transcription Pancreas Pancrea
7 chr12:20783000-20812600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr12:20784600-20810600 Weak transcription Brain Hippocampus Middle brain
9 chr12:20784800-20812600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr12:20784800-20816000 Weak transcription Osteobl bone
11 chr12:20785000-20809400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr12:20785600-20808400 Weak transcription Fetal Kidney kidney
13 chr12:20788000-20812400 Weak transcription Duodenum Mucosa Duodenum
14 chr12:20788200-20806800 Weak transcription Fetal Muscle Leg muscle
15 chr12:20788400-20806800 Weak transcription Aorta Aorta
16 chr12:20788400-20808200 Weak transcription Fetal Muscle Trunk muscle
17 chr12:20788400-20808200 Weak transcription Right Ventricle heart
18 chr12:20788600-20806400 Weak transcription Fetal Stomach stomach
19 chr12:20799600-20806400 Weak transcription Colon Smooth Muscle Colon
20 chr12:20799600-20813000 Weak transcription Rectal Smooth Muscle rectum
21 chr12:20799800-20812600 Weak transcription A549 lung
22 chr12:20800000-20806800 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr12:20800000-20808200 Weak transcription Left Ventricle heart
24 chr12:20800200-20809600 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr12:20800200-20809800 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr12:20800200-20810200 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr12:20800200-20812800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr12:20800600-20809800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr12:20802200-20806800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr12:20802200-20812600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr12:20803000-20806400 Weak transcription Fetal Intestine Small intestine
32 chr12:20804400-20806400 Weak transcription Fetal Intestine Large intestine
33 chr12:20804400-20806600 Weak transcription Stomach Smooth Muscle stomach
34 chr12:20804400-20808200 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr12:20804600-20806600 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr12:20804600-20806800 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr12:20804600-20807000 Weak transcription HUVEC blood vessel
38 chr12:20805800-20812600 Strong transcription Hela-S3 cervix

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Last update: Aug 31, 2015