Variant report

Variant rs1104800
Chromosome Location chr15:52685305-52685306
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52644600-52730200 Weak transcription Esophagus oesophagus
2 chr15:52647400-52690600 Strong transcription Primary neutrophils fromperipheralblood blood
3 chr15:52649000-52687200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
4 chr15:52658400-52687200 Weak transcription Small Intestine intestine
5 chr15:52663200-52711400 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr15:52663400-52708600 Strong transcription Primary monocytes fromperipheralblood blood
7 chr15:52665200-52720600 Weak transcription Pancreas Pancrea
8 chr15:52667000-52686000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr15:52667000-52686600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr15:52668800-52730400 Weak transcription Aorta Aorta
11 chr15:52669400-52693400 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr15:52673800-52730200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr15:52674000-52703800 Weak transcription Fetal Brain Male brain
14 chr15:52675000-52686200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr15:52675000-52697400 Weak transcription Fetal Muscle Trunk muscle
16 chr15:52676000-52705600 Weak transcription Fetal Stomach stomach
17 chr15:52676200-52686400 Weak transcription Fetal Muscle Leg muscle
18 chr15:52676200-52696800 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr15:52676200-52701800 Weak transcription Colon Smooth Muscle Colon
20 chr15:52676400-52685600 Weak transcription Liver Liver
21 chr15:52676400-52696800 Weak transcription Brain Germinal Matrix brain
22 chr15:52676400-52696800 Weak transcription Dnd41 blood
23 chr15:52676400-52697000 Weak transcription Rectal Smooth Muscle rectum
24 chr15:52676400-52699600 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr15:52676400-52701000 Weak transcription HMEC breast
26 chr15:52676400-52709800 Weak transcription NHLF lung
27 chr15:52676400-52721400 Weak transcription Gastric stomach
28 chr15:52676600-52689000 Weak transcription Primary hematopoietic stem cells blood
29 chr15:52676600-52698000 Weak transcription Fetal Thymus thymus
30 chr15:52676600-52701800 Weak transcription Right Ventricle heart
31 chr15:52676600-52706400 Weak transcription Lung lung
32 chr15:52676600-52718600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr15:52677000-52730000 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr15:52677800-52689200 Weak transcription Brain Anterior Caudate brain
35 chr15:52679800-52729600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr15:52679800-52740000 Weak transcription Spleen Spleen
37 chr15:52680600-52686200 Weak transcription GM12878-XiMat blood
38 chr15:52680600-52719800 Weak transcription NH-A brain
39 chr15:52680800-52716400 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr15:52680800-52730000 Weak transcription Brain Angular Gyrus brain
41 chr15:52680800-52740200 Weak transcription Thymus Thymus
42 chr15:52681000-52696600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr15:52681000-52696800 Weak transcription Ovary ovary
44 chr15:52681000-52706800 Weak transcription Brain Substantia Nigra brain
45 chr15:52681200-52689200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr15:52681200-52701000 Weak transcription Duodenum Mucosa Duodenum
47 chr15:52682600-52693200 Strong transcription Primary B cells from cord blood blood
48 chr15:52682800-52685400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr15:52683000-52687000 Strong transcription Primary T cells fromperipheralblood blood
50 chr15:52683000-52690400 Strong transcription Primary B cells from peripheral blood blood

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