The 2.0 version of rSNPBase

Variant report

Variant rs28756182
Chromosome Location chr15:52630946-52630947
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52597800-52643400 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr15:52600800-52646600 Strong transcription Primary neutrophils fromperipheralblood blood
3 chr15:52601000-52643400 Strong transcription Primary monocytes fromperipheralblood blood
4 chr15:52607800-52657800 Weak transcription Small Intestine intestine
5 chr15:52609800-52677600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr15:52610000-52643400 Weak transcription Placenta Placenta
7 chr15:52611600-52650200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr15:52611800-52675800 Weak transcription Gastric stomach
9 chr15:52613000-52642600 Weak transcription Colon Smooth Muscle Colon
10 chr15:52613600-52666600 Weak transcription Right Ventricle heart
11 chr15:52614800-52642600 Weak transcription Esophagus oesophagus
12 chr15:52614800-52653200 Weak transcription Colonic Mucosa Colon
13 chr15:52616800-52631800 Weak transcription Fetal Stomach stomach
14 chr15:52619200-52632000 Weak transcription Fetal Muscle Trunk muscle
15 chr15:52619600-52632000 Weak transcription Brain Germinal Matrix brain
16 chr15:52619800-52640600 Weak transcription Left Ventricle heart
17 chr15:52619800-52641200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr15:52620000-52632000 Weak transcription Lung lung
19 chr15:52620000-52652200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr15:52620600-52659200 Weak transcription Fetal Lung lung
21 chr15:52621200-52666600 Weak transcription Fetal Brain Male brain
22 chr15:52621800-52640200 Weak transcription Fetal Brain Female brain
23 chr15:52621800-52662200 Weak transcription Psoas Muscle Psoas
24 chr15:52622200-52631800 Weak transcription Fetal Muscle Leg muscle
25 chr15:52622400-52631800 Weak transcription Spleen Spleen
26 chr15:52622400-52632000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr15:52622400-52632000 Weak transcription Pancreas Pancrea
28 chr15:52622400-52636000 Weak transcription Rectal Smooth Muscle rectum
29 chr15:52622600-52631200 Weak transcription Ovary ovary
30 chr15:52622600-52632000 Weak transcription Aorta Aorta
31 chr15:52622600-52632000 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr15:52623800-52644200 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr15:52624200-52632000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr15:52624200-52632000 Weak transcription Brain Inferior Temporal Lobe brain
35 chr15:52624200-52632000 Weak transcription Thymus Thymus
36 chr15:52624200-52632200 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr15:52624200-52632200 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr15:52624200-52636200 Weak transcription Fetal Heart heart
39 chr15:52624200-52641200 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr15:52624400-52631800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr15:52624400-52632000 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr15:52624400-52636600 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr15:52624400-52636600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr15:52624600-52631800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr15:52624600-52632000 Weak transcription Dnd41 blood
46 chr15:52624600-52641200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr15:52624600-52641400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
48 chr15:52624600-52642400 Weak transcription Primary T helper naive cells from peripheral blood blood
49 chr15:52624800-52631800 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr15:52625800-52631000 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015