Variant report
| Variant | rs28488423 |
|---|---|
| Chromosome Location | chr15:52646327-52646328 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52600800-52646600 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 2 | chr15:52607800-52657800 | Weak transcription | Small Intestine | intestine |
| 3 | chr15:52609800-52677600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 4 | chr15:52611600-52650200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr15:52611800-52675800 | Weak transcription | Gastric | stomach |
| 6 | chr15:52613600-52666600 | Weak transcription | Right Ventricle | heart |
| 7 | chr15:52614800-52653200 | Weak transcription | Colonic Mucosa | Colon |
| 8 | chr15:52620000-52652200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 9 | chr15:52620600-52659200 | Weak transcription | Fetal Lung | lung |
| 10 | chr15:52621200-52666600 | Weak transcription | Fetal Brain Male | brain |
| 11 | chr15:52621800-52662200 | Weak transcription | Psoas Muscle | Psoas |
| 12 | chr15:52627000-52646600 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 13 | chr15:52630600-52684800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 14 | chr15:52631600-52679200 | Weak transcription | Fetal Intestine Small | intestine |
| 15 | chr15:52632600-52670400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 16 | chr15:52632800-52657400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 17 | chr15:52632800-52662200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 18 | chr15:52633600-52662200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 19 | chr15:52635200-52648200 | Strong transcription | Primary B cells from peripheral blood | blood |
| 20 | chr15:52638000-52671600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 21 | chr15:52640200-52646400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 22 | chr15:52640200-52646600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 23 | chr15:52640200-52647000 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 24 | chr15:52640200-52647600 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 25 | chr15:52640200-52655000 | Weak transcription | Liver | Liver |
| 26 | chr15:52640400-52646600 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 27 | chr15:52640400-52648400 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 28 | chr15:52640600-52648200 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 29 | chr15:52640600-52666600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 30 | chr15:52641400-52646400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 31 | chr15:52641400-52646400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 32 | chr15:52641400-52646400 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 33 | chr15:52641400-52646400 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 34 | chr15:52641400-52646600 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 35 | chr15:52641400-52646600 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 36 | chr15:52641600-52646400 | Strong transcription | Primary T cells from cord blood | blood |
| 37 | chr15:52641600-52648200 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 38 | chr15:52641800-52666800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 39 | chr15:52642200-52646400 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 40 | chr15:52642600-52646400 | Strong transcription | Colon Smooth Muscle | Colon |
| 41 | chr15:52642600-52647000 | Strong transcription | Primary B cells from cord blood | blood |
| 42 | chr15:52642600-52648400 | Strong transcription | NHEK | skin |
| 43 | chr15:52643600-52655600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 44 | chr15:52643800-52650200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 45 | chr15:52643800-52654000 | Weak transcription | Osteobl | bone |
| 46 | chr15:52643800-52655400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 47 | chr15:52644000-52650200 | Weak transcription | Ovary | ovary |
| 48 | chr15:52644000-52664200 | Weak transcription | NHLF | lung |
| 49 | chr15:52644000-52666600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 50 | chr15:52644200-52661000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
