The 2.0 version of rSNPBase

Variant report

Variant rs28663524
Chromosome Location chr15:52731818-52731819
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52679800-52740000 Weak transcription Spleen Spleen
2 chr15:52680800-52740200 Weak transcription Thymus Thymus
3 chr15:52697200-52738600 Weak transcription Fetal Brain Female brain
4 chr15:52702400-52737600 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr15:52710800-52732200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr15:52711600-52732000 Weak transcription Brain Germinal Matrix brain
7 chr15:52716600-52732600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr15:52720200-52732200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr15:52720800-52732400 Weak transcription NHDF-Ad bronchial
10 chr15:52721000-52732200 Weak transcription HSMMtube muscle
11 chr15:52721000-52732800 Weak transcription NH-A brain
12 chr15:52721000-52733200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr15:52721400-52732000 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr15:52721400-52732200 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr15:52721400-52737800 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr15:52721400-52739000 Weak transcription Primary B cells from cord blood blood
17 chr15:52724600-52733600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr15:52728600-52737400 Weak transcription Psoas Muscle Psoas
19 chr15:52729000-52739400 Enhancers Primary monocytes fromperipheralblood blood
20 chr15:52729200-52734800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr15:52729800-52734800 Enhancers Adipose Nuclei Adipose
22 chr15:52730000-52734200 Enhancers Brain Cingulate Gyrus brain
23 chr15:52730000-52735600 Enhancers Brain Anterior Caudate brain
24 chr15:52730200-52732600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr15:52730200-52734800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr15:52730400-52732600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr15:52730400-52744600 Weak transcription Primary T regulatory cells fromperipheralblood blood
28 chr15:52730600-52732200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr15:52730600-52732200 Weak transcription Muscle Satellite Cultured Cells --
30 chr15:52730600-52732200 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr15:52730600-52732800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr15:52730600-52733000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr15:52730600-52733200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr15:52730600-52734200 Weak transcription GM12878-XiMat blood
35 chr15:52730600-52734400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr15:52730600-52736200 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr15:52730600-52737200 Weak transcription Right Ventricle heart
38 chr15:52730600-52739400 Weak transcription Esophagus oesophagus
39 chr15:52730600-52741600 Weak transcription Ovary ovary
40 chr15:52730600-52741600 Weak transcription HUVEC blood vessel
41 chr15:52730600-52741800 Weak transcription Gastric stomach
42 chr15:52730800-52732200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr15:52730800-52732200 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr15:52730800-52732200 Weak transcription A549 lung
45 chr15:52730800-52732200 Weak transcription NHEK skin
46 chr15:52730800-52732800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr15:52730800-52733000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr15:52730800-52733200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr15:52730800-52734200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr15:52730800-52735400 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015