The 2.0 version of rSNPBase

Variant report

Variant rs9920195
Chromosome Location chr15:52732749-52732750
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52679800-52740000 Weak transcription Spleen Spleen
2 chr15:52680800-52740200 Weak transcription Thymus Thymus
3 chr15:52697200-52738600 Weak transcription Fetal Brain Female brain
4 chr15:52702400-52737600 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr15:52721000-52732800 Weak transcription NH-A brain
6 chr15:52721000-52733200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr15:52721400-52737800 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr15:52721400-52739000 Weak transcription Primary B cells from cord blood blood
9 chr15:52724600-52733600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr15:52728600-52737400 Weak transcription Psoas Muscle Psoas
11 chr15:52729000-52739400 Enhancers Primary monocytes fromperipheralblood blood
12 chr15:52729200-52734800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr15:52729800-52734800 Enhancers Adipose Nuclei Adipose
14 chr15:52730000-52734200 Enhancers Brain Cingulate Gyrus brain
15 chr15:52730000-52735600 Enhancers Brain Anterior Caudate brain
16 chr15:52730200-52734800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
17 chr15:52730400-52744600 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr15:52730600-52732800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr15:52730600-52733000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr15:52730600-52733200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr15:52730600-52734200 Weak transcription GM12878-XiMat blood
22 chr15:52730600-52734400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr15:52730600-52736200 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr15:52730600-52737200 Weak transcription Right Ventricle heart
25 chr15:52730600-52739400 Weak transcription Esophagus oesophagus
26 chr15:52730600-52741600 Weak transcription Ovary ovary
27 chr15:52730600-52741600 Weak transcription HUVEC blood vessel
28 chr15:52730600-52741800 Weak transcription Gastric stomach
29 chr15:52730800-52732800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr15:52730800-52733000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr15:52730800-52733200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr15:52730800-52734200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr15:52730800-52735400 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr15:52730800-52738000 Weak transcription Colon Smooth Muscle Colon
35 chr15:52730800-52741800 Weak transcription Primary B cells from peripheral blood blood
36 chr15:52731200-52732800 Weak transcription H1 Cell Line embryonic stem cell
37 chr15:52731200-52732800 Enhancers Monocytes-CD14+_RO01746 blood
38 chr15:52731200-52733800 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr15:52731200-52734400 Weak transcription Primary T cells fromperipheralblood blood
40 chr15:52731200-52734400 Weak transcription Right Atrium heart
41 chr15:52731400-52733000 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr15:52731600-52734400 Enhancers Brain Angular Gyrus brain
43 chr15:52731600-52734400 Enhancers Brain Hippocampus Middle brain
44 chr15:52731800-52733200 Enhancers Brain Substantia Nigra brain
45 chr15:52731800-52734600 Enhancers HMEC breast
46 chr15:52731800-52734800 Enhancers Brain Inferior Temporal Lobe brain
47 chr15:52732200-52732800 Enhancers Lung lung
48 chr15:52732200-52733000 Enhancers Skeletal Muscle Female skeletal muscle
49 chr15:52732200-52734600 Enhancers Muscle Satellite Cultured Cells --
50 chr15:52732200-52734600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015