The 2.0 version of rSNPBase

Variant report

Variant rs28660682
Chromosome Location chr15:52640628-52640629
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52597800-52643400 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr15:52600800-52646600 Strong transcription Primary neutrophils fromperipheralblood blood
3 chr15:52601000-52643400 Strong transcription Primary monocytes fromperipheralblood blood
4 chr15:52607800-52657800 Weak transcription Small Intestine intestine
5 chr15:52609800-52677600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr15:52610000-52643400 Weak transcription Placenta Placenta
7 chr15:52611600-52650200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr15:52611800-52675800 Weak transcription Gastric stomach
9 chr15:52613000-52642600 Weak transcription Colon Smooth Muscle Colon
10 chr15:52613600-52666600 Weak transcription Right Ventricle heart
11 chr15:52614800-52642600 Weak transcription Esophagus oesophagus
12 chr15:52614800-52653200 Weak transcription Colonic Mucosa Colon
13 chr15:52619800-52641200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr15:52620000-52652200 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr15:52620600-52659200 Weak transcription Fetal Lung lung
16 chr15:52621200-52666600 Weak transcription Fetal Brain Male brain
17 chr15:52621800-52662200 Weak transcription Psoas Muscle Psoas
18 chr15:52623800-52644200 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr15:52624200-52641200 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr15:52624600-52641200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr15:52624600-52641400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr15:52624600-52642400 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr15:52627000-52646600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr15:52627200-52641200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr15:52627400-52641400 Weak transcription Duodenum Mucosa Duodenum
26 chr15:52630000-52641400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr15:52630000-52641600 Weak transcription Primary T cells from cord blood blood
28 chr15:52630200-52641400 Weak transcription Brain Angular Gyrus brain
29 chr15:52630200-52641400 Weak transcription Osteobl bone
30 chr15:52630200-52641600 Weak transcription NHDF-Ad bronchial
31 chr15:52630600-52641400 Weak transcription Fetal Thymus thymus
32 chr15:52630600-52684800 Weak transcription H9 Cell Line embryonic stem cell
33 chr15:52631200-52641400 Weak transcription HMEC breast
34 chr15:52631600-52679200 Weak transcription Fetal Intestine Small intestine
35 chr15:52632600-52641400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr15:52632600-52641400 Weak transcription Fetal Stomach stomach
37 chr15:52632600-52641400 Weak transcription Ovary ovary
38 chr15:52632600-52641400 Weak transcription Pancreas Pancrea
39 chr15:52632600-52641400 Weak transcription Spleen Spleen
40 chr15:52632600-52641400 Weak transcription Dnd41 blood
41 chr15:52632600-52643200 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr15:52632600-52643400 Weak transcription Lung lung
43 chr15:52632600-52644200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr15:52632600-52670400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr15:52632800-52641200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr15:52632800-52641200 Weak transcription Stomach Smooth Muscle stomach
47 chr15:52632800-52641400 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr15:52632800-52641400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr15:52632800-52641400 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr15:52632800-52641400 Weak transcription Sigmoid Colon Sigmoid Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015