Variant report
| Variant | rs7167890 |
|---|---|
| Chromosome Location | chr15:52608410-52608411 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52593600-52608600 | Weak transcription | Fetal Brain Male | brain |
| 2 | chr15:52595400-52610800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 3 | chr15:52595400-52614200 | Weak transcription | Fetal Lung | lung |
| 4 | chr15:52595600-52609800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 5 | chr15:52595800-52628800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 6 | chr15:52596000-52608800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 7 | chr15:52596000-52611000 | Weak transcription | Fetal Stomach | stomach |
| 8 | chr15:52596200-52623600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 9 | chr15:52596400-52608600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 10 | chr15:52597600-52608600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 11 | chr15:52597800-52629600 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 12 | chr15:52597800-52643400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 13 | chr15:52599200-52611000 | Weak transcription | NHLF | lung |
| 14 | chr15:52599400-52611000 | Weak transcription | Fetal Thymus | thymus |
| 15 | chr15:52599400-52611000 | Weak transcription | Thymus | Thymus |
| 16 | chr15:52599800-52611000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 17 | chr15:52599800-52611000 | Weak transcription | A549 | lung |
| 18 | chr15:52600400-52611200 | Weak transcription | Colonic Mucosa | Colon |
| 19 | chr15:52600600-52611000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 20 | chr15:52600600-52624200 | Weak transcription | Liver | Liver |
| 21 | chr15:52600800-52622800 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 22 | chr15:52600800-52646600 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 23 | chr15:52601000-52608600 | Weak transcription | Brain Anterior Caudate | brain |
| 24 | chr15:52601000-52610000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 25 | chr15:52601000-52611000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 26 | chr15:52601000-52622600 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 27 | chr15:52601000-52643400 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 28 | chr15:52601200-52611000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 29 | chr15:52601200-52615200 | Strong transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 30 | chr15:52601200-52622600 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 31 | chr15:52601400-52609800 | Weak transcription | Gastric | stomach |
| 32 | chr15:52601400-52611000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 33 | chr15:52601400-52611000 | Weak transcription | Right Atrium | heart |
| 34 | chr15:52601400-52612200 | Weak transcription | Right Ventricle | heart |
| 35 | chr15:52601600-52622400 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 36 | chr15:52601600-52622800 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 37 | chr15:52601800-52611000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 38 | chr15:52601800-52611000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 39 | chr15:52601800-52616600 | Strong transcription | Primary B cells from cord blood | blood |
| 40 | chr15:52601800-52621400 | Weak transcription | Psoas Muscle | Psoas |
| 41 | chr15:52602000-52609400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 42 | chr15:52602000-52609800 | Weak transcription | Pancreas | Pancrea |
| 43 | chr15:52602000-52611000 | Weak transcription | Esophagus | oesophagus |
| 44 | chr15:52602000-52622800 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 45 | chr15:52602200-52611000 | Weak transcription | Fetal Heart | heart |
| 46 | chr15:52602200-52622600 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 47 | chr15:52602600-52608600 | Weak transcription | Osteobl | bone |
| 48 | chr15:52602600-52622800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 49 | chr15:52603000-52609000 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 50 | chr15:52603200-52616400 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
