Variant report
| Variant | rs28534436 |
|---|---|
| Chromosome Location | chr15:52625281-52625282 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52595800-52628800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 2 | chr15:52597800-52629600 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 3 | chr15:52597800-52643400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 4 | chr15:52600800-52646600 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 5 | chr15:52601000-52643400 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 6 | chr15:52607800-52657800 | Weak transcription | Small Intestine | intestine |
| 7 | chr15:52608600-52629200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 8 | chr15:52609800-52677600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 9 | chr15:52610000-52643400 | Weak transcription | Placenta | Placenta |
| 10 | chr15:52611400-52629400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 11 | chr15:52611600-52629800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 12 | chr15:52611600-52650200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 13 | chr15:52611800-52675800 | Weak transcription | Gastric | stomach |
| 14 | chr15:52613000-52642600 | Weak transcription | Colon Smooth Muscle | Colon |
| 15 | chr15:52613600-52666600 | Weak transcription | Right Ventricle | heart |
| 16 | chr15:52614800-52642600 | Weak transcription | Esophagus | oesophagus |
| 17 | chr15:52614800-52653200 | Weak transcription | Colonic Mucosa | Colon |
| 18 | chr15:52616800-52631800 | Weak transcription | Fetal Stomach | stomach |
| 19 | chr15:52619200-52632000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 20 | chr15:52619600-52632000 | Weak transcription | Brain Germinal Matrix | brain |
| 21 | chr15:52619800-52628600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 22 | chr15:52619800-52640600 | Weak transcription | Left Ventricle | heart |
| 23 | chr15:52619800-52641200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 24 | chr15:52620000-52629000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 25 | chr15:52620000-52632000 | Weak transcription | Lung | lung |
| 26 | chr15:52620000-52652200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 27 | chr15:52620200-52626400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 28 | chr15:52620200-52626600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 29 | chr15:52620200-52629600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 30 | chr15:52620600-52659200 | Weak transcription | Fetal Lung | lung |
| 31 | chr15:52620800-52627000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 32 | chr15:52621200-52626800 | Weak transcription | NHLF | lung |
| 33 | chr15:52621200-52666600 | Weak transcription | Fetal Brain Male | brain |
| 34 | chr15:52621600-52627000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 35 | chr15:52621800-52640200 | Weak transcription | Fetal Brain Female | brain |
| 36 | chr15:52621800-52662200 | Weak transcription | Psoas Muscle | Psoas |
| 37 | chr15:52622000-52626800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 38 | chr15:52622000-52627000 | Weak transcription | HSMM | muscle |
| 39 | chr15:52622000-52628000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 40 | chr15:52622000-52629600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 41 | chr15:52622200-52629600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 42 | chr15:52622200-52631800 | Weak transcription | Fetal Muscle Leg | muscle |
| 43 | chr15:52622400-52627000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 44 | chr15:52622400-52629400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 45 | chr15:52622400-52631800 | Weak transcription | Spleen | Spleen |
| 46 | chr15:52622400-52632000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 47 | chr15:52622400-52632000 | Weak transcription | Pancreas | Pancrea |
| 48 | chr15:52622400-52636000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 49 | chr15:52622600-52625800 | Weak transcription | Primary B cells from cord blood | blood |
| 50 | chr15:52622600-52626000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
