The 2.0 version of rSNPBase

Variant report

Variant rs4776042
Chromosome Location chr15:52674130-52674131
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52609800-52677600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr15:52611800-52675800 Weak transcription Gastric stomach
3 chr15:52630600-52684800 Weak transcription H9 Cell Line embryonic stem cell
4 chr15:52631600-52679200 Weak transcription Fetal Intestine Small intestine
5 chr15:52644200-52680800 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr15:52644600-52730200 Weak transcription Esophagus oesophagus
7 chr15:52647400-52690600 Strong transcription Primary neutrophils fromperipheralblood blood
8 chr15:52649000-52687200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr15:52649600-52677600 Strong transcription Primary T regulatory cells fromperipheralblood blood
10 chr15:52649800-52676400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr15:52653600-52677400 Weak transcription Colonic Mucosa Colon
12 chr15:52655800-52675200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr15:52658400-52687200 Weak transcription Small Intestine intestine
14 chr15:52659000-52676600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr15:52659000-52676600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
16 chr15:52659200-52676400 Strong transcription Stomach Smooth Muscle stomach
17 chr15:52659200-52676600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr15:52659200-52676800 Strong transcription Brain Inferior Temporal Lobe brain
19 chr15:52659200-52677000 Strong transcription Duodenum Smooth Muscle Duodenum
20 chr15:52659400-52676600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr15:52660400-52676800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr15:52661000-52676600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr15:52661200-52676600 Strong transcription Cortex derived primary cultured neurospheres brain
24 chr15:52662600-52683600 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr15:52662600-52685000 Weak transcription Psoas Muscle Psoas
26 chr15:52663000-52675400 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr15:52663200-52711400 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr15:52663400-52708600 Strong transcription Primary monocytes fromperipheralblood blood
29 chr15:52665200-52720600 Weak transcription Pancreas Pancrea
30 chr15:52665600-52677200 Weak transcription Fetal Intestine Large intestine
31 chr15:52666000-52675600 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr15:52667000-52679600 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr15:52667000-52682000 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr15:52667000-52684800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr15:52667000-52686000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr15:52667000-52686600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr15:52667400-52675200 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr15:52667400-52675800 Weak transcription Rectal Smooth Muscle rectum
39 chr15:52667400-52676000 Weak transcription Fetal Thymus thymus
40 chr15:52667600-52676600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr15:52667600-52676800 Strong transcription Breast Myoepithelial Primary Cells Breast
42 chr15:52667600-52677000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr15:52667600-52684400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr15:52668000-52675200 Weak transcription Liver Liver
45 chr15:52668000-52683400 Weak transcription H1 Cell Line embryonic stem cell
46 chr15:52668600-52675600 Weak transcription Dnd41 blood
47 chr15:52668800-52675800 Weak transcription Right Ventricle heart
48 chr15:52668800-52679400 Weak transcription NH-A brain
49 chr15:52668800-52683800 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr15:52668800-52730400 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015