The 2.0 version of rSNPBase

Variant report

Variant rs73410759
Chromosome Location chr15:52678456-52678457
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52630600-52684800 Weak transcription H9 Cell Line embryonic stem cell
2 chr15:52631600-52679200 Weak transcription Fetal Intestine Small intestine
3 chr15:52644200-52680800 Weak transcription iPS-15b Cell Line embryonic stem cell
4 chr15:52644600-52730200 Weak transcription Esophagus oesophagus
5 chr15:52647400-52690600 Strong transcription Primary neutrophils fromperipheralblood blood
6 chr15:52649000-52687200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr15:52658400-52687200 Weak transcription Small Intestine intestine
8 chr15:52662600-52683600 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr15:52662600-52685000 Weak transcription Psoas Muscle Psoas
10 chr15:52663200-52711400 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr15:52663400-52708600 Strong transcription Primary monocytes fromperipheralblood blood
12 chr15:52665200-52720600 Weak transcription Pancreas Pancrea
13 chr15:52667000-52679600 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr15:52667000-52682000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr15:52667000-52684800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr15:52667000-52686000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr15:52667000-52686600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr15:52667600-52684400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr15:52668000-52683400 Weak transcription H1 Cell Line embryonic stem cell
20 chr15:52668800-52679400 Weak transcription NH-A brain
21 chr15:52668800-52683800 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr15:52668800-52730400 Weak transcription Aorta Aorta
23 chr15:52669200-52683400 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr15:52669400-52693400 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr15:52671200-52682000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr15:52671400-52681400 Strong transcription Primary T helper cells fromperipheralblood blood
27 chr15:52672000-52679600 Weak transcription Duodenum Mucosa Duodenum
28 chr15:52672400-52684000 Weak transcription Fetal Heart heart
29 chr15:52673800-52683800 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr15:52673800-52684800 Weak transcription Hela-S3 cervix
31 chr15:52673800-52730200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr15:52674000-52703800 Weak transcription Fetal Brain Male brain
33 chr15:52674800-52681400 Strong transcription Primary B cells from peripheral blood blood
34 chr15:52675000-52686200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr15:52675000-52697400 Weak transcription Fetal Muscle Trunk muscle
36 chr15:52676000-52679600 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr15:52676000-52683200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr15:52676000-52684600 Weak transcription Osteobl bone
39 chr15:52676000-52705600 Weak transcription Fetal Stomach stomach
40 chr15:52676200-52679800 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr15:52676200-52683400 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr15:52676200-52686400 Weak transcription Fetal Muscle Leg muscle
43 chr15:52676200-52696800 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr15:52676200-52701800 Weak transcription Colon Smooth Muscle Colon
45 chr15:52676400-52678600 Weak transcription Ovary ovary
46 chr15:52676400-52679200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr15:52676400-52679200 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr15:52676400-52679400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr15:52676400-52679400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr15:52676400-52679400 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015