The 2.0 version of rSNPBase

Variant report

Variant rs28499517
Chromosome Location chr15:52736128-52736129
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52679800-52740000 Weak transcription Spleen Spleen
2 chr15:52680800-52740200 Weak transcription Thymus Thymus
3 chr15:52697200-52738600 Weak transcription Fetal Brain Female brain
4 chr15:52702400-52737600 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr15:52721400-52737800 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr15:52721400-52739000 Weak transcription Primary B cells from cord blood blood
7 chr15:52728600-52737400 Weak transcription Psoas Muscle Psoas
8 chr15:52729000-52739400 Enhancers Primary monocytes fromperipheralblood blood
9 chr15:52730400-52744600 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr15:52730600-52736200 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr15:52730600-52737200 Weak transcription Right Ventricle heart
12 chr15:52730600-52739400 Weak transcription Esophagus oesophagus
13 chr15:52730600-52741600 Weak transcription Ovary ovary
14 chr15:52730600-52741600 Weak transcription HUVEC blood vessel
15 chr15:52730600-52741800 Weak transcription Gastric stomach
16 chr15:52730800-52738000 Weak transcription Colon Smooth Muscle Colon
17 chr15:52730800-52741800 Weak transcription Primary B cells from peripheral blood blood
18 chr15:52732400-52737200 Weak transcription Left Ventricle heart
19 chr15:52732600-52737200 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr15:52732600-52750600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr15:52733000-52737200 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr15:52733000-52738200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr15:52733200-52737600 Weak transcription Brain Substantia Nigra brain
24 chr15:52734000-52737200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr15:52734200-52737400 Weak transcription Brain Cingulate Gyrus brain
26 chr15:52734400-52737200 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr15:52734400-52738400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr15:52734400-52738800 Weak transcription Brain Hippocampus Middle brain
29 chr15:52734400-52740400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr15:52734400-52743800 Weak transcription Brain Angular Gyrus brain
31 chr15:52734600-52737200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr15:52734600-52737400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr15:52734600-52737400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr15:52734600-52737800 Weak transcription Muscle Satellite Cultured Cells --
35 chr15:52734600-52741600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr15:52734600-52753200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr15:52734800-52737200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr15:52734800-52737200 Weak transcription Right Atrium heart
39 chr15:52734800-52738000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr15:52734800-52738200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr15:52734800-52738600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr15:52734800-52739800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr15:52734800-52740000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr15:52734800-52740200 Weak transcription HSMMtube muscle
45 chr15:52734800-52743800 Weak transcription Brain Inferior Temporal Lobe brain
46 chr15:52734800-52747400 Weak transcription HSMM muscle
47 chr15:52735000-52737800 Weak transcription H1 Cell Line embryonic stem cell
48 chr15:52735400-52737200 Weak transcription Adipose Nuclei Adipose
49 chr15:52735400-52738200 Weak transcription Primary T cells fromperipheralblood blood
50 chr15:52735400-52740800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015