Variant report
| Variant | rs28515624 |
|---|---|
| Chromosome Location | chr15:52661196-52661197 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52609800-52677600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr15:52611800-52675800 | Weak transcription | Gastric | stomach |
| 3 | chr15:52613600-52666600 | Weak transcription | Right Ventricle | heart |
| 4 | chr15:52621200-52666600 | Weak transcription | Fetal Brain Male | brain |
| 5 | chr15:52621800-52662200 | Weak transcription | Psoas Muscle | Psoas |
| 6 | chr15:52630600-52684800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 7 | chr15:52631600-52679200 | Weak transcription | Fetal Intestine Small | intestine |
| 8 | chr15:52632600-52670400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 9 | chr15:52632800-52662200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 10 | chr15:52633600-52662200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 11 | chr15:52638000-52671600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 12 | chr15:52640600-52666600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 13 | chr15:52641800-52666800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 14 | chr15:52644000-52664200 | Weak transcription | NHLF | lung |
| 15 | chr15:52644000-52666600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 16 | chr15:52644200-52680800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 17 | chr15:52644600-52661200 | Weak transcription | Thymus | Thymus |
| 18 | chr15:52644600-52661600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 19 | chr15:52644600-52662000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 20 | chr15:52644600-52662200 | Weak transcription | Fetal Muscle Leg | muscle |
| 21 | chr15:52644600-52662400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 22 | chr15:52644600-52662400 | Weak transcription | Fetal Stomach | stomach |
| 23 | chr15:52644600-52663800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 24 | chr15:52644600-52663800 | Weak transcription | Spleen | Spleen |
| 25 | chr15:52644600-52665400 | Weak transcription | A549 | lung |
| 26 | chr15:52644600-52730200 | Weak transcription | Esophagus | oesophagus |
| 27 | chr15:52645600-52661200 | Weak transcription | NH-A | brain |
| 28 | chr15:52646000-52661600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 29 | chr15:52646200-52661600 | Weak transcription | Left Ventricle | heart |
| 30 | chr15:52646200-52663800 | Weak transcription | Lung | lung |
| 31 | chr15:52647400-52690600 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 32 | chr15:52649000-52687200 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 33 | chr15:52649600-52670600 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 34 | chr15:52649600-52677600 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 35 | chr15:52649800-52662800 | Strong transcription | Primary B cells from peripheral blood | blood |
| 36 | chr15:52649800-52676400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 37 | chr15:52650000-52670200 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 38 | chr15:52650000-52670400 | Strong transcription | HUVEC | blood vessel |
| 39 | chr15:52650200-52669200 | Strong transcription | Primary B cells from cord blood | blood |
| 40 | chr15:52650400-52666800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 41 | chr15:52650800-52661400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 42 | chr15:52651000-52661400 | Weak transcription | NHEK | skin |
| 43 | chr15:52651000-52666600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 44 | chr15:52652200-52670400 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 45 | chr15:52653200-52663600 | Weak transcription | Pancreas | Pancrea |
| 46 | chr15:52653400-52666600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 47 | chr15:52653400-52666800 | Weak transcription | Aorta | Aorta |
| 48 | chr15:52653600-52677400 | Weak transcription | Colonic Mucosa | Colon |
| 49 | chr15:52654200-52661800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 50 | chr15:52654400-52666400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
