Variant report
| Variant | rs28366864 |
|---|---|
| Chromosome Location | chr15:52668112-52668113 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52609800-52677600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 2 | chr15:52611800-52675800 | Weak transcription | Gastric | stomach |
| 3 | chr15:52630600-52684800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 4 | chr15:52631600-52679200 | Weak transcription | Fetal Intestine Small | intestine |
| 5 | chr15:52632600-52670400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 6 | chr15:52638000-52671600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 7 | chr15:52644200-52680800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 8 | chr15:52644600-52730200 | Weak transcription | Esophagus | oesophagus |
| 9 | chr15:52647400-52690600 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 10 | chr15:52649000-52687200 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 11 | chr15:52649600-52670600 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 12 | chr15:52649600-52677600 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 13 | chr15:52649800-52676400 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 14 | chr15:52650000-52670200 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 15 | chr15:52650000-52670400 | Strong transcription | HUVEC | blood vessel |
| 16 | chr15:52650200-52669200 | Strong transcription | Primary B cells from cord blood | blood |
| 17 | chr15:52652200-52670400 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 18 | chr15:52653600-52677400 | Weak transcription | Colonic Mucosa | Colon |
| 19 | chr15:52655800-52675200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 20 | chr15:52656800-52674000 | Strong transcription | Primary T cells from cord blood | blood |
| 21 | chr15:52657400-52670000 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 22 | chr15:52658400-52687200 | Weak transcription | Small Intestine | intestine |
| 23 | chr15:52659000-52676600 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 24 | chr15:52659000-52676600 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 25 | chr15:52659200-52669000 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 26 | chr15:52659200-52669200 | Strong transcription | Adipose Nuclei | Adipose |
| 27 | chr15:52659200-52671800 | Strong transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 28 | chr15:52659200-52676400 | Strong transcription | Stomach Smooth Muscle | stomach |
| 29 | chr15:52659200-52676600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 30 | chr15:52659200-52676800 | Strong transcription | Brain Inferior Temporal Lobe | brain |
| 31 | chr15:52659200-52677000 | Strong transcription | Duodenum Smooth Muscle | Duodenum |
| 32 | chr15:52659400-52676600 | Strong transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 33 | chr15:52659800-52673000 | Weak transcription | Fetal Kidney | kidney |
| 34 | chr15:52660400-52668800 | Strong transcription | Primary hematopoietic stem cells | blood |
| 35 | chr15:52660400-52670200 | Strong transcription | Fetal Brain Female | brain |
| 36 | chr15:52660400-52676800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 37 | chr15:52660600-52668600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 38 | chr15:52660800-52668600 | Strong transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 39 | chr15:52660800-52669200 | Strong transcription | Primary T helper naive cells fromperipheralblood | blood |
| 40 | chr15:52660800-52669200 | Strong transcription | Brain Substantia Nigra | brain |
| 41 | chr15:52660800-52669400 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 42 | chr15:52660800-52670400 | Strong transcription | Brain Hippocampus Middle | brain |
| 43 | chr15:52661000-52676600 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 44 | chr15:52661200-52669200 | Strong transcription | HSMM | muscle |
| 45 | chr15:52661200-52676600 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 46 | chr15:52661400-52668800 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 47 | chr15:52661600-52669200 | Strong transcription | Left Ventricle | heart |
| 48 | chr15:52662200-52669600 | Strong transcription | Brain Angular Gyrus | brain |
| 49 | chr15:52662200-52670400 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 50 | chr15:52662400-52669800 | Strong transcription | Brain Anterior Caudate | brain |
