Variant report

Variant rs11062616
Chromosome Location chr12:474797-474798
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:457400-478800 Strong transcription Primary neutrophils fromperipheralblood blood
2 chr12:457600-479200 Strong transcription Rectal Mucosa Donor 29 rectum
3 chr12:457600-480000 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr12:457800-478000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr12:458200-478200 Strong transcription Skeletal Muscle Female skeletal muscle
6 chr12:462000-478600 Strong transcription Stomach Smooth Muscle stomach
7 chr12:462400-479200 Strong transcription Osteobl bone
8 chr12:465800-477200 Strong transcription Placenta Amnion Placenta Amnion
9 chr12:466400-477400 Strong transcription Skeletal Muscle Male skeletal muscle
10 chr12:467200-479200 Strong transcription Rectal Mucosa Donor 31 rectum
11 chr12:467600-476800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr12:467800-477000 Strong transcription Rectal Smooth Muscle rectum
13 chr12:467800-477200 Strong transcription HepG2 liver
14 chr12:468000-479800 Strong transcription HSMM muscle
15 chr12:468400-477200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr12:468400-479600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr12:468600-476800 Strong transcription Colon Smooth Muscle Colon
18 chr12:469200-478200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr12:469200-479800 Strong transcription Fetal Adrenal Gland Adrenal Gland
20 chr12:469800-478400 Strong transcription Muscle Satellite Cultured Cells --
21 chr12:470400-476800 Strong transcription Primary T helper naive cells from peripheral blood blood
22 chr12:470600-476200 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr12:470600-478000 Strong transcription Primary T killer memory cells from peripheral blood blood
24 chr12:470600-478200 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr12:471400-475400 Strong transcription Hela-S3 cervix
26 chr12:471400-477400 Weak transcription K562 blood
27 chr12:472200-474800 Strong transcription Fetal Heart heart
28 chr12:472800-476200 Weak transcription Psoas Muscle Psoas
29 chr12:473200-474800 ZNF genes & repeats Fetal Intestine Small intestine
30 chr12:473200-475400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr12:473200-475400 ZNF genes & repeats Fetal Brain Female brain
32 chr12:473200-475400 ZNF genes & repeats A549 lung
33 chr12:473400-474800 ZNF genes & repeats Fetal Stomach stomach
34 chr12:473400-475400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
35 chr12:473400-476000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
36 chr12:473400-476600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr12:473600-475200 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr12:473600-475200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr12:473600-475600 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
40 chr12:473600-476000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
41 chr12:473800-474800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
42 chr12:473800-474800 Strong transcription Pancreas Pancrea
43 chr12:473800-477200 Strong transcription HSMMtube muscle
44 chr12:473800-478000 Strong transcription HUVEC blood vessel
45 chr12:473800-479200 Strong transcription Brain Substantia Nigra brain
46 chr12:474000-474800 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr12:474000-474800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr12:474000-474800 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr12:474000-474800 ZNF genes & repeats Primary T helper 17 cells PMA-I stimulated --
50 chr12:474000-474800 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood

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