Variant report

Variant rs4980887
Chromosome Location chr12:460947-460948
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:394000-474400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr12:428200-474000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr12:432000-474000 Weak transcription Stomach Mucosa stomach
4 chr12:438200-461400 Weak transcription Fetal Heart heart
5 chr12:441200-468600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr12:443000-465600 Weak transcription Psoas Muscle Psoas
7 chr12:443600-461400 Weak transcription HMEC breast
8 chr12:443600-461600 Weak transcription H9 Cell Line embryonic stem cell
9 chr12:448000-462200 Weak transcription Right Atrium heart
10 chr12:452000-468000 Strong transcription Fetal Thymus thymus
11 chr12:452200-461600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr12:452600-468400 Weak transcription Right Ventricle heart
13 chr12:452800-461400 Weak transcription Rectal Smooth Muscle rectum
14 chr12:452800-461400 Weak transcription Spleen Spleen
15 chr12:452800-461800 Weak transcription Aorta Aorta
16 chr12:452800-461800 Weak transcription NHLF lung
17 chr12:456400-474000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr12:457400-467600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr12:457400-467800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr12:457400-468200 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr12:457400-474200 Strong transcription Primary T helper cells PMA-I stimulated --
22 chr12:457400-474200 Strong transcription Primary T helper cells fromperipheralblood blood
23 chr12:457400-478800 Strong transcription Primary neutrophils fromperipheralblood blood
24 chr12:457600-461400 Strong transcription Muscle Satellite Cultured Cells --
25 chr12:457600-461800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr12:457600-463000 Strong transcription Brain Hippocampus Middle brain
27 chr12:457600-464400 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr12:457600-464800 Strong transcription Sigmoid Colon Sigmoid Colon
29 chr12:457600-465000 Strong transcription Ovary ovary
30 chr12:457600-465600 Strong transcription Rectal Mucosa Donor 31 rectum
31 chr12:457600-465800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr12:457600-466600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr12:457600-467000 Strong transcription Fetal Intestine Large intestine
34 chr12:457600-467200 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr12:457600-467200 Strong transcription Fetal Muscle Leg muscle
36 chr12:457600-468200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr12:457600-468400 Strong transcription HUES64 Cell Line embryonic stem cell
38 chr12:457600-468400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr12:457600-468400 Strong transcription Cortex derived primary cultured neurospheres brain
40 chr12:457600-468400 Strong transcription Adipose Nuclei Adipose
41 chr12:457600-468400 Strong transcription Fetal Muscle Trunk muscle
42 chr12:457600-468400 Strong transcription Placenta Placenta
43 chr12:457600-473800 Strong transcription Primary T cells fromperipheralblood blood
44 chr12:457600-474000 Strong transcription HUES48 Cell Line embryonic stem cell
45 chr12:457600-474000 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr12:457600-474000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr12:457600-474000 Strong transcription GM12878-XiMat blood
48 chr12:457600-474200 Strong transcription Primary monocytes fromperipheralblood blood
49 chr12:457600-474200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
50 chr12:457600-474200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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