Variant report
| Variant | rs11071405 |
|---|---|
| Chromosome Location | chr15:59331066-59331067 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:59281200-59352600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 2 | chr15:59281400-59347800 | Weak transcription | Colonic Mucosa | Colon |
| 3 | chr15:59281800-59352200 | Weak transcription | Aorta | Aorta |
| 4 | chr15:59281800-59353400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr15:59283800-59344800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 6 | chr15:59283800-59359000 | Weak transcription | Fetal Brain Male | brain |
| 7 | chr15:59288400-59351200 | Weak transcription | Brain Hippocampus Middle | brain |
| 8 | chr15:59295200-59349200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 9 | chr15:59295600-59335400 | Weak transcription | Lung | lung |
| 10 | chr15:59301200-59335400 | Weak transcription | HUVEC | blood vessel |
| 11 | chr15:59305400-59354400 | Weak transcription | Gastric | stomach |
| 12 | chr15:59306000-59353400 | Weak transcription | Fetal Heart | heart |
| 13 | chr15:59308400-59358000 | Weak transcription | Spleen | Spleen |
| 14 | chr15:59309200-59336600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 15 | chr15:59309200-59359000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 16 | chr15:59317600-59331400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 17 | chr15:59319600-59331800 | Weak transcription | Brain Cingulate Gyrus | brain |
| 18 | chr15:59321400-59336800 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 19 | chr15:59321600-59336200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 20 | chr15:59323000-59331200 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 21 | chr15:59323000-59331200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 22 | chr15:59323000-59331800 | Strong transcription | Placenta | Placenta |
| 23 | chr15:59323200-59331200 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 24 | chr15:59323600-59359000 | Weak transcription | Esophagus | oesophagus |
| 25 | chr15:59323800-59335400 | Weak transcription | Psoas Muscle | Psoas |
| 26 | chr15:59323800-59343000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 27 | chr15:59323800-59347600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 28 | chr15:59323800-59348400 | Weak transcription | Brain Anterior Caudate | brain |
| 29 | chr15:59324000-59331600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 30 | chr15:59324000-59335600 | Weak transcription | Brain Angular Gyrus | brain |
| 31 | chr15:59324000-59344600 | Weak transcription | HMEC | breast |
| 32 | chr15:59324000-59345200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 33 | chr15:59324000-59347800 | Weak transcription | NHLF | lung |
| 34 | chr15:59324000-59350600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 35 | chr15:59324000-59350600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 36 | chr15:59324000-59351000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 37 | chr15:59324600-59331800 | ZNF genes & repeats | GM12878-XiMat | blood |
| 38 | chr15:59325000-59331600 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 39 | chr15:59325000-59335600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 40 | chr15:59325000-59354800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 41 | chr15:59325200-59344400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 42 | chr15:59325200-59345000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 43 | chr15:59325200-59345800 | Weak transcription | NHDF-Ad | bronchial |
| 44 | chr15:59325400-59344800 | Weak transcription | NH-A | brain |
| 45 | chr15:59325400-59347800 | Weak transcription | HSMMtube | muscle |
| 46 | chr15:59325400-59350000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 47 | chr15:59325400-59352000 | Weak transcription | Fetal Lung | lung |
| 48 | chr15:59325600-59333600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 49 | chr15:59325600-59338600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 50 | chr15:59325800-59331400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
