Variant report
| Variant | rs58417366 |
|---|---|
| Chromosome Location | chr15:59346221-59346222 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:59281200-59352600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 2 | chr15:59281400-59347800 | Weak transcription | Colonic Mucosa | Colon |
| 3 | chr15:59281800-59352200 | Weak transcription | Aorta | Aorta |
| 4 | chr15:59281800-59353400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr15:59283800-59359000 | Weak transcription | Fetal Brain Male | brain |
| 6 | chr15:59288400-59351200 | Weak transcription | Brain Hippocampus Middle | brain |
| 7 | chr15:59295200-59349200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 8 | chr15:59305400-59354400 | Weak transcription | Gastric | stomach |
| 9 | chr15:59306000-59353400 | Weak transcription | Fetal Heart | heart |
| 10 | chr15:59308400-59358000 | Weak transcription | Spleen | Spleen |
| 11 | chr15:59309200-59359000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr15:59323600-59359000 | Weak transcription | Esophagus | oesophagus |
| 13 | chr15:59323800-59347600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 14 | chr15:59323800-59348400 | Weak transcription | Brain Anterior Caudate | brain |
| 15 | chr15:59324000-59347800 | Weak transcription | NHLF | lung |
| 16 | chr15:59324000-59350600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 17 | chr15:59324000-59350600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 18 | chr15:59324000-59351000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 19 | chr15:59325000-59354800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 20 | chr15:59325400-59347800 | Weak transcription | HSMMtube | muscle |
| 21 | chr15:59325400-59350000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 22 | chr15:59325400-59352000 | Weak transcription | Fetal Lung | lung |
| 23 | chr15:59325800-59348800 | Weak transcription | Fetal Kidney | kidney |
| 24 | chr15:59325800-59350600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 25 | chr15:59326400-59349400 | Weak transcription | Colon Smooth Muscle | Colon |
| 26 | chr15:59326400-59365200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 27 | chr15:59327600-59347800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 28 | chr15:59328400-59348000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 29 | chr15:59328800-59350600 | Weak transcription | Brain Germinal Matrix | brain |
| 30 | chr15:59329000-59350800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 31 | chr15:59329200-59349000 | Weak transcription | NHEK | skin |
| 32 | chr15:59329200-59352200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 33 | chr15:59329200-59352600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 34 | chr15:59329400-59352600 | Weak transcription | Pancreas | Pancrea |
| 35 | chr15:59329600-59346600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 36 | chr15:59331000-59351600 | Weak transcription | Fetal Brain Female | brain |
| 37 | chr15:59332400-59350600 | Weak transcription | Thymus | Thymus |
| 38 | chr15:59332400-59358200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 39 | chr15:59335800-59350600 | Weak transcription | Lung | lung |
| 40 | chr15:59335800-59354400 | Weak transcription | Psoas Muscle | Psoas |
| 41 | chr15:59336000-59349000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 42 | chr15:59336800-59347400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 43 | chr15:59339800-59352600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 44 | chr15:59340000-59350000 | Weak transcription | Fetal Muscle Leg | muscle |
| 45 | chr15:59340000-59352600 | Weak transcription | Ovary | ovary |
| 46 | chr15:59340200-59349000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 47 | chr15:59340200-59350600 | Weak transcription | Fetal Stomach | stomach |
| 48 | chr15:59341000-59353600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 49 | chr15:59341400-59350600 | Weak transcription | Left Ventricle | heart |
| 50 | chr15:59342400-59364400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
