The 2.0 version of rSNPBase

Variant report

Variant rs11119929
Chromosome Location chr1:212577086-212577087
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212526800-212582800 Weak transcription Fetal Brain Male brain
2 chr1:212528400-212583000 Weak transcription Fetal Kidney kidney
3 chr1:212553200-212578400 Weak transcription K562 blood
4 chr1:212556800-212587600 Weak transcription Small Intestine intestine
5 chr1:212558600-212578800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:212558600-212580000 Weak transcription Left Ventricle heart
7 chr1:212560200-212578400 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr1:212560400-212580200 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr1:212560600-212578200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr1:212560600-212578800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr1:212560600-212580200 Weak transcription HSMMtube muscle
12 chr1:212560600-212582000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr1:212560600-212582000 Weak transcription Gastric stomach
14 chr1:212561000-212578000 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr1:212561000-212579800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr1:212561000-212579800 Weak transcription Stomach Smooth Muscle stomach
17 chr1:212561000-212580000 Weak transcription Brain Hippocampus Middle brain
18 chr1:212561000-212582400 Weak transcription Aorta Aorta
19 chr1:212562000-212578400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:212564200-212578800 Weak transcription Esophagus oesophagus
21 chr1:212564600-212577800 Weak transcription Spleen Spleen
22 chr1:212564600-212578600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr1:212564600-212579800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr1:212569600-212582600 Weak transcription Ovary ovary
25 chr1:212570400-212578800 Weak transcription Fetal Stomach stomach
26 chr1:212570600-212577200 Strong transcription Fetal Thymus thymus
27 chr1:212570600-212577800 Weak transcription Fetal Muscle Trunk muscle
28 chr1:212570600-212578400 Weak transcription HepG2 liver
29 chr1:212570600-212582000 Weak transcription Duodenum Mucosa Duodenum
30 chr1:212570800-212580000 Weak transcription Fetal Lung lung
31 chr1:212571000-212578600 Weak transcription Brain Anterior Caudate brain
32 chr1:212571000-212586200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr1:212571200-212578400 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr1:212571200-212580000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:212571400-212577800 Weak transcription Primary T cells fromperipheralblood blood
36 chr1:212571400-212580000 Weak transcription NH-A brain
37 chr1:212571600-212577600 Strong transcription Primary T cells from cord blood blood
38 chr1:212571600-212578800 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr1:212571800-212578600 Weak transcription Fetal Brain Female brain
40 chr1:212571800-212579800 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr1:212572000-212577800 Weak transcription Fetal Muscle Leg muscle
42 chr1:212572000-212578400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr1:212572000-212579800 Weak transcription Brain Germinal Matrix brain
44 chr1:212572200-212578400 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr1:212572600-212577600 Weak transcription Primary T regulatory cells fromperipheralblood blood
46 chr1:212572600-212582000 Weak transcription Rectal Smooth Muscle rectum
47 chr1:212572600-212585000 Strong transcription Dnd41 blood
48 chr1:212572800-212585600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr1:212573000-212578600 Weak transcription Primary B cells from cord blood blood
50 chr1:212573000-212579800 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015