The 2.0 version of rSNPBase

Variant report

Variant rs12062818
Chromosome Location chr1:212573259-212573260
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212526800-212582800 Weak transcription Fetal Brain Male brain
2 chr1:212528400-212583000 Weak transcription Fetal Kidney kidney
3 chr1:212540400-212575400 Weak transcription HUVEC blood vessel
4 chr1:212553200-212578400 Weak transcription K562 blood
5 chr1:212556800-212587600 Weak transcription Small Intestine intestine
6 chr1:212558600-212578800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr1:212558600-212580000 Weak transcription Left Ventricle heart
8 chr1:212560200-212578400 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr1:212560400-212580200 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr1:212560600-212578200 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr1:212560600-212578800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr1:212560600-212580200 Weak transcription HSMMtube muscle
13 chr1:212560600-212582000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr1:212560600-212582000 Weak transcription Gastric stomach
15 chr1:212561000-212575400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:212561000-212578000 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr1:212561000-212579800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr1:212561000-212579800 Weak transcription Stomach Smooth Muscle stomach
19 chr1:212561000-212580000 Weak transcription Brain Hippocampus Middle brain
20 chr1:212561000-212582400 Weak transcription Aorta Aorta
21 chr1:212562000-212578400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:212564200-212578800 Weak transcription Esophagus oesophagus
23 chr1:212564400-212575400 Weak transcription Thymus Thymus
24 chr1:212564600-212576200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr1:212564600-212577800 Weak transcription Spleen Spleen
26 chr1:212564600-212578600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:212564600-212579800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:212569600-212582600 Weak transcription Ovary ovary
29 chr1:212570400-212578800 Weak transcription Fetal Stomach stomach
30 chr1:212570600-212574400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr1:212570600-212577200 Strong transcription Fetal Thymus thymus
32 chr1:212570600-212577800 Weak transcription Fetal Muscle Trunk muscle
33 chr1:212570600-212578400 Weak transcription HepG2 liver
34 chr1:212570600-212582000 Weak transcription Duodenum Mucosa Duodenum
35 chr1:212570800-212575400 Weak transcription HSMM muscle
36 chr1:212570800-212576000 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr1:212570800-212580000 Weak transcription Fetal Lung lung
38 chr1:212571000-212575200 Weak transcription NHLF lung
39 chr1:212571000-212578600 Weak transcription Brain Anterior Caudate brain
40 chr1:212571000-212586200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr1:212571200-212574200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:212571200-212575400 Weak transcription Osteobl bone
43 chr1:212571200-212576600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr1:212571200-212578400 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr1:212571200-212580000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:212571400-212574600 Weak transcription NHEK skin
47 chr1:212571400-212576200 Weak transcription Brain Substantia Nigra brain
48 chr1:212571400-212577800 Weak transcription Primary T cells fromperipheralblood blood
49 chr1:212571400-212580000 Weak transcription NH-A brain
50 chr1:212571600-212574000 Strong transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015