Variant report

Variant	rs11156740
Chromosome Location	chr14:32842189-32842190
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10129362	0.87[CEU][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[ASN][1000 genomes]
rs10483399	1.00[MEX][hapmap]
rs11156739	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17098884	1.00[MEX][hapmap]
rs17098933	0.85[CEU][hapmap];1.00[ASN][1000 genomes]
rs4981958	0.85[GIH][hapmap]
rs7145111	1.00[CHD][hapmap];1.00[ASN][1000 genomes]
rs7151141	1.00[MEX][hapmap]
rs8017657	0.85[CEU][hapmap]

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32830600-32843800	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr14:32834400-32845200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr14:32836400-32843600	Enhancers	Brain Anterior Caudate	brain
4	chr14:32836400-32844000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr14:32836400-32844200	Enhancers	Muscle Satellite Cultured Cells	--
6	chr14:32836600-32843200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr14:32836600-32846800	Weak transcription	Fetal Brain Male	brain
8	chr14:32837600-32842600	Weak transcription	Fetal Heart	heart
9	chr14:32838400-32845400	Enhancers	NHEK	skin
10	chr14:32839000-32843800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr14:32839000-32845600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr14:32839200-32842400	Enhancers	HMEC	breast
13	chr14:32839400-32842200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr14:32839400-32842200	Enhancers	HSMM	muscle
15	chr14:32839400-32842200	Enhancers	NHLF	lung
16	chr14:32839400-32842800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr14:32839400-32843200	Enhancers	Brain Angular Gyrus	brain
18	chr14:32839400-32843400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr14:32839400-32843600	Enhancers	Hela-S3	cervix
20	chr14:32839400-32843800	Enhancers	NH-A	brain
21	chr14:32839400-32843800	Enhancers	Osteobl	bone
22	chr14:32840000-32843200	Weak transcription	Brain Germinal Matrix	brain
23	chr14:32840200-32842800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
24	chr14:32840600-32842200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr14:32840800-32843200	Enhancers	Brain Substantia Nigra	brain
26	chr14:32841000-32842800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr14:32841000-32845000	Enhancers	Brain Hippocampus Middle	brain
28	chr14:32841400-32842600	Weak transcription	Brain Inferior Temporal Lobe	brain
29	chr14:32841400-32843800	Enhancers	NHDF-Ad	bronchial
30	chr14:32841600-32843400	Enhancers	HUES48 Cell Line	embryonic stem cell
31	chr14:32841800-32842400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr14:32841800-32842400	Enhancers	HSMMtube	muscle
33	chr14:32841800-32842600	Enhancers	K562	blood
34	chr14:32841800-32843400	Enhancers	iPS-18 Cell Line	embryonic stem cell
35	chr14:32841800-32844400	Enhancers	Brain Cingulate Gyrus	brain
36	chr14:32842000-32843000	Enhancers	iPS-20b Cell Line	embryonic stem cell
37	chr14:32842000-32843200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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