Variant report

Variant	rs11163826
Chromosome Location	chr1:84231122-84231123
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 56 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:56)

rs_ID	r²[population]
rs10430047	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10430048	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10430063	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10430064	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10489502	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10489503	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10489504	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10874419	0.82[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10874420	0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10874421	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10874422	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11163828	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11163829	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11163830	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11163832	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11163833	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11163835	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11163837	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11163838	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11163839	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11163840	0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11163841	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11163842	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12035289	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12041369	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12044606	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12045391	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12059428	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12080974	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12085122	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12087099	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12088221	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12088867	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12091588	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12092736	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12093748	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17129275	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17129297	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17129321	0.93[ASN][1000 genomes]
rs17129344	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17129346	0.96[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17129416	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17129475	0.82[ASN][1000 genomes]
rs28476757	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs36017423	0.95[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs4140461	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60860789	0.83[ASN][1000 genomes]
rs61766224	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs714280	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs717234	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72952444	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs74094961	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7529582	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs969125	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs969126	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs997869	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84227800-84234600	Weak transcription	Primary B cells from peripheral blood	blood
2	chr1:84228400-84235400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr1:84229600-84231200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr1:84229600-84231400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr1:84230000-84231200	Active TSS	Pancreatic Islets	Pancreatic Islet
6	chr1:84230000-84232000	Weak transcription	Fetal Intestine Small	intestine
7	chr1:84230000-84232200	Enhancers	HepG2	liver
8	chr1:84230400-84231800	Weak transcription	Primary B cells from cord blood	blood
9	chr1:84230400-84232000	Weak transcription	Fetal Lung	lung
10	chr1:84230400-84233600	Weak transcription	Fetal Kidney	kidney
11	chr1:84230400-84234800	Weak transcription	Fetal Brain Male	brain
12	chr1:84230400-84235000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr1:84230600-84231200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr1:84230600-84234200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr1:84230600-84235400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr1:84231000-84231600	Flanking Active TSS	Liver	Liver

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