Variant report

Variant	rs12041369
Chromosome Location	chr1:84237442-84237443
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:84237146..84239264-chr1:84241212..84243471,2	K562	blood:

Extended variants
information (count: 96 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:96)

rs_ID	r²[population]
rs10157076	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10158343	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1040576	0.81[ASN][1000 genomes]
rs10430047	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10430048	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10430063	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10430064	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10465742	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10489502	0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10489503	0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10489504	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10489506	0.82[ASN][1000 genomes]
rs10489507	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10782820	0.84[ASN][1000 genomes]
rs10874419	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10874420	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10874421	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10874422	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11163826	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11163828	0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11163829	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11163830	0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11163832	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11163833	0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11163835	0.87[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11163837	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11163838	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11163839	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11163840	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11163841	0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11163842	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11163847	0.83[EUR][1000 genomes]
rs11163848	0.83[EUR][1000 genomes]
rs11163850	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11163853	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11163854	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12028642	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12029461	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12033157	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12033859	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12035289	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12044606	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12045391	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12048434	0.83[ASN][1000 genomes]
rs12057556	0.81[ASN][1000 genomes]
rs12059428	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12067203	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12069168	0.82[ASN][1000 genomes]
rs12070108	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12071975	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12080974	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12082383	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12082518	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12085122	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12085367	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12087099	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12088221	0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12088867	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12091588	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12092736	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12093748	0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17129275	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17129297	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17129321	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17129344	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17129346	0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17129416	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17129475	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17129836	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17129848	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17129850	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17129859	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17129909	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1951928	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2057084	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs28476757	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35299117	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs36017423	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4001468	0.81[ASN][1000 genomes]
rs4140461	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs55958267	0.82[ASN][1000 genomes]
rs60743554	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs60860789	0.90[ASN][1000 genomes]
rs61766224	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs61767991	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs61767992	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs61767993	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs714280	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs717234	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72952444	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs74094961	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs742779	0.81[ASN][1000 genomes]
rs7529582	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs969125	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs969126	0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs997869	0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84237200-84241600	Weak transcription	Liver	Liver

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