Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1085	0.83[ASN][1000 genomes]
rs10874659	0.85[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs11164634	0.84[ASN][1000 genomes]
rs12025494	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12034088	0.83[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs12045132	0.81[AFR][1000 genomes]
rs12047349	0.83[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs12078115	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12080230	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12086644	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1241163	0.84[ASN][1000 genomes]
rs1241184	0.87[ASN][1000 genomes]
rs1241185	0.86[ASN][1000 genomes]
rs1676486	0.84[ASN][1000 genomes]
rs17127203	0.86[ASN][1000 genomes]
rs1763347	0.84[ASN][1000 genomes]
rs2783567	0.86[ASN][1000 genomes]
rs3753844	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs478271	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4907978	0.80[AFR][1000 genomes]
rs6701464	0.85[ASN][1000 genomes]
rs9659030	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830882	chr1:103192683-103355802	Weak transcription Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:103293000-103299200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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