Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1085	0.83[CHB][hapmap];0.93[JPT][hapmap]
rs10874659	0.82[AFR][1000 genomes]
rs11164599	0.81[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs11164618	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11164634	1.00[CEU][hapmap];0.88[CHB][hapmap]
rs12025494	1.00[CEU][hapmap];0.88[CHB][hapmap];0.93[JPT][hapmap];0.81[EUR][1000 genomes]
rs12036095	0.89[ASN][1000 genomes]
rs12045132	0.83[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs12078115	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12080230	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1241163	0.83[CHB][hapmap]
rs1241184	0.88[CHB][hapmap];0.93[JPT][hapmap]
rs1676486	0.94[CHB][hapmap];0.86[JPT][hapmap]
rs17127203	1.00[CEU][hapmap];0.94[CHB][hapmap];0.92[JPT][hapmap]
rs1763347	0.89[CHB][hapmap];0.86[JPT][hapmap]
rs2783567	0.94[CHB][hapmap];0.93[JPT][hapmap]
rs3753844	1.00[CEU][hapmap];0.89[CHB][hapmap];0.93[JPT][hapmap]
rs478271	0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4907978	0.83[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs4908273	0.82[CEU][hapmap];0.83[CHB][hapmap]
rs6658542	0.83[AFR][1000 genomes]
rs7550513	0.89[ASN][1000 genomes]
rs8179334	1.00[CEU][hapmap];0.83[CHB][hapmap]
rs9659030	0.94[CHB][hapmap];0.93[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830882	chr1:103192683-103355802	Weak transcription Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:103277000-103277800	Enhancers	Fetal Intestine Large	intestine

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