The 2.0 version of rSNPBase

Variant report

Variant rs11164880
Chromosome Location chr1:93658096-93658097
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93646600-93660400 Weak transcription Lung lung
2 chr1:93646800-93664600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:93647000-93663600 Weak transcription Fetal Stomach stomach
4 chr1:93647000-93664600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:93647000-93688000 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:93647000-93688600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:93647000-93756400 Weak transcription Gastric stomach
8 chr1:93647200-93660400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:93647200-93660400 Weak transcription Thymus Thymus
10 chr1:93647200-93660800 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr1:93647200-93661400 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr1:93647200-93664200 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr1:93647200-93664200 Weak transcription Fetal Intestine Small intestine
14 chr1:93647200-93664400 Weak transcription Fetal Muscle Leg muscle
15 chr1:93647200-93664600 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr1:93647200-93664600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:93647200-93667600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:93647200-93667600 Weak transcription Adipose Nuclei Adipose
19 chr1:93647200-93668200 Weak transcription Muscle Satellite Cultured Cells --
20 chr1:93647200-93681200 Weak transcription HUVEC blood vessel
21 chr1:93647200-93684400 Weak transcription NH-A brain
22 chr1:93647200-93685000 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr1:93647200-93707400 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:93647200-93757600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:93647400-93659000 Weak transcription HSMM muscle
26 chr1:93647400-93661000 Weak transcription Fetal Muscle Trunk muscle
27 chr1:93647400-93664800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:93647400-93667400 Weak transcription Duodenum Mucosa Duodenum
29 chr1:93647600-93660400 Weak transcription Primary T cells fromperipheralblood blood
30 chr1:93647600-93664400 Weak transcription NHLF lung
31 chr1:93647600-93670400 Weak transcription Liver Liver
32 chr1:93647600-93706600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr1:93647800-93660400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr1:93647800-93665000 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr1:93647800-93667800 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr1:93648000-93660000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr1:93648200-93660400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:93648400-93672200 Weak transcription A549 lung
39 chr1:93648600-93666000 Weak transcription NHEK skin
40 chr1:93648800-93662200 Weak transcription Hela-S3 cervix
41 chr1:93649000-93684800 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr1:93650000-93666000 Strong transcription HUES48 Cell Line embryonic stem cell
43 chr1:93651000-93659800 Weak transcription NHDF-Ad bronchial
44 chr1:93651000-93684800 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr1:93651400-93678000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:93651600-93662800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:93651600-93663600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr1:93652000-93660400 Weak transcription Primary B cells from peripheral blood blood
49 chr1:93654200-93664000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:93654200-93708400 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015