Variant report

Variant	rs693737
Chromosome Location	chr1:93724924-93724925
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:93716580..93719392-chr1:93724593..93726917,2	K562	blood:

Extended variants
information (count: 163 )
Associated
traits (count: 25 )

rSNPs within LD-proxies of this variant (count:162)

rs_ID	r²[population]
rs1000607	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1010476	0.81[CHB][hapmap];0.88[CHD][hapmap]
rs1057257	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1060622	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.96[MEX][hapmap];0.95[TSI][hapmap]
rs10782955	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10782957	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10782959	0.95[CHB][hapmap];0.90[CHD][hapmap];0.84[JPT][hapmap]
rs10874759	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10874762	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10874764	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10874772	0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10874773	0.93[AFR][1000 genomes];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10874777	0.86[EUR][1000 genomes]
rs1088318	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11164870	0.91[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap]
rs11164876	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.83[MEX][hapmap];0.98[TSI][hapmap];0.85[EUR][1000 genomes]
rs11164879	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11164880	0.87[EUR][1000 genomes]
rs11164881	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11164885	0.80[ASN][1000 genomes]
rs11164902	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11164904	0.91[ASN][1000 genomes]
rs11164908	0.86[CHB][hapmap]
rs11576494	0.85[EUR][1000 genomes]
rs12030549	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12030843	0.86[CHB][hapmap];0.80[ASN][1000 genomes]
rs12031765	0.80[ASN][1000 genomes]
rs12033147	0.84[CHB][hapmap]
rs12038699	0.91[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.95[MEX][hapmap];0.95[TSI][hapmap]
rs12044557	0.86[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];0.80[ASN][1000 genomes]
rs12044657	0.88[EUR][1000 genomes]
rs12044883	0.95[CEU][hapmap];0.94[CHB][hapmap];0.82[JPT][hapmap];0.88[YRI][hapmap];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12118230	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12118262	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12124011	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12124771	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12128131	0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs12130734	0.84[EUR][1000 genomes]
rs12133576	0.92[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];0.90[JPT][hapmap];0.85[LWK][hapmap];0.93[MKK][hapmap];0.91[TSI][hapmap];0.90[YRI][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12138486	0.87[CHD][hapmap];0.84[JPT][hapmap]
rs12139633	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12405487	0.80[ASN][1000 genomes]
rs12406245	0.95[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.90[YRI][hapmap];0.87[EUR][1000 genomes]
rs12563120	0.86[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap]
rs12752223	0.81[ASN][1000 genomes]
rs1335679	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1426318	0.83[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.90[YRI][hapmap];0.87[EUR][1000 genomes]
rs1474927	0.95[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.90[GIH][hapmap];0.90[JPT][hapmap];0.96[MEX][hapmap];0.90[TSI][hapmap]
rs1535699	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1535701	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1559828	0.92[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];0.90[JPT][hapmap];0.85[LWK][hapmap];0.93[MKK][hapmap];0.91[TSI][hapmap];0.90[YRI][hapmap];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1572343	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.82[LWK][hapmap];0.95[MEX][hapmap];0.84[MKK][hapmap];0.98[TSI][hapmap];0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1593512	0.87[EUR][1000 genomes]
rs1856027	0.91[CEU][hapmap];0.95[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.95[TSI][hapmap]
rs1932314	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs2031225	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2031226	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2152358	0.83[AMR][1000 genomes]
rs2255722	0.81[CHB][hapmap];0.90[CHD][hapmap]
rs2281524	0.81[CHB][hapmap];0.85[CHD][hapmap]
rs2281525	0.81[CHB][hapmap]
rs2295423	0.91[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.95[GIH][hapmap];0.95[JPT][hapmap];0.96[MEX][hapmap];0.95[TSI][hapmap];0.80[AMR][1000 genomes]
rs2296558	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2297707	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2391251	0.80[ASN][1000 genomes]
rs2391254	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.90[YRI][hapmap];0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2484486	0.81[CHB][hapmap];0.87[CHD][hapmap]
rs2749732	0.85[CHD][hapmap]
rs2765545	1.00[CEU][hapmap];0.97[CHD][hapmap];0.90[GIH][hapmap];0.89[JPT][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2783489	0.95[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap]
rs2783490	0.81[CHB][hapmap];0.90[CHD][hapmap]
rs2783495	0.81[CHB][hapmap];0.90[CHD][hapmap]
rs2783499	0.86[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap]
rs2783500	0.85[CHB][hapmap]
rs2783501	0.86[CHB][hapmap]
rs2815429	0.85[CHD][hapmap]
rs35940311	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3754186	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs3767962	0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3767964	0.91[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.90[YRI][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3904665	0.80[ASN][1000 genomes]
rs3904666	0.81[CHB][hapmap];0.90[CHD][hapmap]
rs4000699	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4240966	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4484937	0.86[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];0.80[ASN][1000 genomes]
rs4847235	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.83[MEX][hapmap];0.98[TSI][hapmap];0.85[EUR][1000 genomes]
rs4847240	0.92[ASW][hapmap];0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.86[GIH][hapmap];0.90[JPT][hapmap];0.85[LWK][hapmap];0.93[MKK][hapmap];0.91[TSI][hapmap];0.90[YRI][hapmap];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4847399	0.91[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.95[GIH][hapmap];0.90[JPT][hapmap];0.91[MEX][hapmap];0.95[TSI][hapmap]
rs4847402	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4847406	0.94[ASN][1000 genomes]
rs4847408	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4847410	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4847412	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4847419	0.87[EUR][1000 genomes]
rs4847420	0.87[EUR][1000 genomes]
rs531358	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.90[YRI][hapmap];0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs531514	0.81[CEU][hapmap];0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs535760	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs547866	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs555161	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs565919	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs569414	1.00[CEU][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs58354545	0.80[ASN][1000 genomes]
rs59417472	0.87[EUR][1000 genomes]
rs602204	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs612037	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs61799500	0.80[ASN][1000 genomes]
rs61799516	0.80[ASN][1000 genomes]
rs622608	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs624131	0.82[EUR][1000 genomes]
rs627779	0.80[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs637646	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6541349	0.90[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs6541401	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6541404	0.92[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];0.96[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6658257	0.82[ASN][1000 genomes]
rs6676902	0.80[ASN][1000 genomes]
rs6680022	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6680107	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6682670	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6684908	0.80[ASN][1000 genomes]
rs6688230	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6694508	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6703310	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs682514	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs687394	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72959220	0.80[ASN][1000 genomes]
rs7417952	0.87[EUR][1000 genomes]
rs7418101	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7512911	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7513705	1.00[CEU][hapmap];0.95[CHB][hapmap];0.89[EUR][1000 genomes]
rs7517363	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.80[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7524964	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7525248	0.95[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.90[YRI][hapmap];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7526112	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7532195	0.85[EUR][1000 genomes]
rs7535628	1.00[CEU][hapmap];0.95[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];0.83[JPT][hapmap];0.91[MEX][hapmap];1.00[TSI][hapmap];0.87[EUR][1000 genomes]
rs7537403	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7539307	1.00[CEU][hapmap];0.95[CHB][hapmap];0.88[EUR][1000 genomes]
rs7540025	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7541304	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7541687	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7547244	0.97[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7551485	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7553465	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7553916	0.83[ASN][1000 genomes]
rs771481	0.90[CHB][hapmap]
rs797661	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs797666	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs797668	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs797671	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs797672	0.94[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs797676	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs797680	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.81[AMR][1000 genomes]
rs797681	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs810027	0.81[CHB][hapmap];0.90[CHD][hapmap]
rs942196	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9432453	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9432459	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9432465	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9432681	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9660390	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830625	chr1:93566378-93735246	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

mRNA abundance (count:25)

SNP	Gene	Cis/trans	Tissue	Source
rs693737	RP4-717I23.3	cis	Skin Sun Exposed Lower leg	GTEx
rs693737	RP4-717I23.3	cis	Muscle Skeletal	GTEx
rs693737	RP4-717I23.3	cis	lung	GTEx
rs693737	TMED5	cis	parietal	SCAN
rs693737	RP4-717I23.3	cis	Artery Tibial	GTEx
rs693737	GCLM	cis	cerebellum	SCAN
rs693737	TMED5	Cis_1M	lymphoblastoid	RTeQTL
rs693737	CCDC18	cis	parietal	SCAN
rs693737	RP4-717I23.3	cis	Nerve Tibial	GTEx
rs693737	RP4-717I23.3	cis	Thyroid	GTEx
rs693737	RP4-717I23.3	cis	Whole Blood	GTEx
rs693737	RP4-717I23.3	cis	Heart Left Ventricle	GTEx
rs693737	DR1	Cis_1M	lymphoblastoid	RTeQTL
rs693737	DR1	cis	Adipose Subcutaneous	GTEx
rs693737	BARHL2	cis	parietal	SCAN
rs693737	DR1	cis	parietal	SCAN
rs693737	RP4-717I23.3	cis	Adipose Subcutaneous	GTEx
rs693737	RP4-717I23.3	cis	Artery Aorta	GTEx
rs693737	RP4-717I23.3	cis	Esophagus Mucosa	GTEx
rs693737	TMED5	cis	cerebellum	SCAN
rs693737	ABCD3	cis	cerebellum	SCAN
rs693737	RP4-717I23.3	cis	Esophagus Muscularis	GTEx
rs693737	USP1	trans	cerebellum	SCAN
rs693737	DR1	cis	multi-tissue	Pritchard
rs693737	CCDC18	cis	Nerve Tibial	GTEx

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:93647000-93756400	Weak transcription	Gastric	stomach
2	chr1:93647200-93757600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr1:93666600-93727000	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr1:93690400-93729400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr1:93691200-93732400	Weak transcription	HUVEC	blood vessel
6	chr1:93692200-93787800	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr1:93704200-93729800	Weak transcription	Hela-S3	cervix
8	chr1:93706400-93727000	Weak transcription	K562	blood
9	chr1:93707000-93727400	Weak transcription	Liver	Liver
10	chr1:93709000-93726400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr1:93709000-93727400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr1:93709000-93728200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr1:93709000-93728200	Weak transcription	HMEC	breast
14	chr1:93709200-93727400	Weak transcription	Duodenum Mucosa	Duodenum
15	chr1:93709400-93727600	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr1:93709600-93725000	Weak transcription	HepG2	liver
17	chr1:93709600-93725600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr1:93709600-93727000	Weak transcription	NHEK	skin
19	chr1:93709800-93727000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr1:93709800-93727000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr1:93710000-93727000	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr1:93710200-93727000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
23	chr1:93711600-93727000	Weak transcription	H9 Cell Line	embryonic stem cell
24	chr1:93713200-93727000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
25	chr1:93716200-93728400	Weak transcription	Pancreas	Pancrea
26	chr1:93716800-93727600	Weak transcription	Fetal Kidney	kidney
27	chr1:93717200-93726200	Strong transcription	Monocytes-CD14+_RO01746	blood
28	chr1:93717800-93725600	Strong transcription	Dnd41	blood
29	chr1:93717800-93727800	Weak transcription	Ovary	ovary
30	chr1:93718200-93727000	Weak transcription	Primary T cells fromperipheralblood	blood
31	chr1:93718400-93727000	Weak transcription	Fetal Lung	lung
32	chr1:93718400-93727000	Weak transcription	Rectal Smooth Muscle	rectum
33	chr1:93718600-93727000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
34	chr1:93718600-93727800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
35	chr1:93718600-93728200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
36	chr1:93718800-93727000	Weak transcription	Primary B cells from peripheral blood	blood
37	chr1:93718800-93727400	Weak transcription	Skeletal Muscle Male	skeletal muscle
38	chr1:93718800-93728000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr1:93718800-93728200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
40	chr1:93718800-93728200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
41	chr1:93719000-93727000	Weak transcription	Stomach Smooth Muscle	stomach
42	chr1:93719000-93727400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
43	chr1:93719000-93727600	Weak transcription	Primary T helper cells PMA-I stimulated	--
44	chr1:93719000-93727600	Weak transcription	Fetal Muscle Trunk	muscle
45	chr1:93719000-93728000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
46	chr1:93719200-93727000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
47	chr1:93719200-93727200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
48	chr1:93719200-93727600	Weak transcription	Aorta	Aorta
49	chr1:93719200-93728200	Weak transcription	A549	lung
50	chr1:93719400-93726400	Weak transcription	Fetal Intestine Small	intestine

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