The 2.0 version of rSNPBase

Variant report

Variant rs61799516
Chromosome Location chr1:93752982-93752983
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93647000-93756400 Weak transcription Gastric stomach
2 chr1:93647200-93757600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr1:93692200-93787800 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:93720000-93762000 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr1:93728600-93754800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr1:93728600-93764400 Weak transcription Psoas Muscle Psoas
7 chr1:93728600-93769400 Weak transcription Rectal Smooth Muscle rectum
8 chr1:93728600-93770400 Weak transcription HSMM muscle
9 chr1:93728800-93753800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
10 chr1:93728800-93754800 Weak transcription Ovary ovary
11 chr1:93728800-93755000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:93728800-93755000 Weak transcription Left Ventricle heart
13 chr1:93728800-93755000 Weak transcription Stomach Smooth Muscle stomach
14 chr1:93728800-93778200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr1:93729000-93790200 Weak transcription Osteobl bone
16 chr1:93729800-93754800 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr1:93729800-93763200 Weak transcription Pancreas Pancrea
18 chr1:93730000-93754400 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr1:93730400-93754600 Weak transcription Fetal Muscle Leg muscle
20 chr1:93731000-93765400 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr1:93731200-93787400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr1:93731800-93754200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:93731800-93754600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:93736400-93771200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr1:93739200-93755000 Weak transcription HSMMtube muscle
26 chr1:93739600-93754200 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr1:93739600-93766600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:93742000-93754400 Weak transcription Duodenum Mucosa Duodenum
29 chr1:93743600-93755400 Weak transcription Small Intestine intestine
30 chr1:93743600-93770200 Weak transcription Fetal Kidney kidney
31 chr1:93744200-93753800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr1:93745800-93780200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:93746000-93753800 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr1:93746000-93753800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr1:93746000-93755000 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr1:93746200-93753200 Weak transcription Primary hematopoietic stem cells blood
37 chr1:93746200-93754200 Weak transcription Fetal Lung lung
38 chr1:93746200-93754200 Weak transcription Fetal Muscle Trunk muscle
39 chr1:93746400-93753600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr1:93746400-93753800 Weak transcription Primary B cells from peripheral blood blood
41 chr1:93746600-93789400 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr1:93746800-93780000 Weak transcription Aorta Aorta
43 chr1:93747800-93755000 Weak transcription Brain Anterior Caudate brain
44 chr1:93750200-93753800 Weak transcription Fetal Intestine Large intestine
45 chr1:93750800-93756800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:93751000-93753400 Strong transcription Primary T helper cells fromperipheralblood blood
47 chr1:93751200-93761800 Weak transcription Spleen Spleen
48 chr1:93751400-93757200 Strong transcription Primary T cells from cord blood blood
49 chr1:93751600-93753200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
50 chr1:93751600-93753400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015