The 2.0 version of rSNPBase

Variant report

Variant rs35915989
Chromosome Location chr1:93838902-93838903
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93813400-93840000 Weak transcription H9 Cell Line embryonic stem cell
2 chr1:93813400-93840400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:93815400-93839800 Weak transcription Aorta Aorta
4 chr1:93816600-93841800 Weak transcription Brain Cingulate Gyrus brain
5 chr1:93816800-93841200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:93822200-93840200 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr1:93824200-93839400 Weak transcription Lung lung
8 chr1:93824200-93839800 Weak transcription Fetal Brain Female brain
9 chr1:93824200-93840000 Weak transcription Right Ventricle heart
10 chr1:93824200-93841000 Weak transcription Brain Germinal Matrix brain
11 chr1:93824200-93841000 Weak transcription Spleen Spleen
12 chr1:93824400-93839400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:93824400-93839400 Weak transcription Brain Anterior Caudate brain
14 chr1:93824400-93842000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr1:93824600-93840000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr1:93825200-93840800 Weak transcription Brain Inferior Temporal Lobe brain
17 chr1:93825400-93840600 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr1:93825600-93839400 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr1:93826200-93841400 Weak transcription Brain Hippocampus Middle brain
20 chr1:93828200-93842400 Weak transcription Primary hematopoietic stem cells blood
21 chr1:93829200-93843600 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr1:93829800-93839400 Weak transcription Adipose Nuclei Adipose
23 chr1:93831600-93839200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr1:93831600-93841000 Weak transcription NHEK skin
25 chr1:93831800-93840600 Weak transcription A549 lung
26 chr1:93832400-93840000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:93832600-93839800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:93833200-93839400 Weak transcription Esophagus oesophagus
29 chr1:93833200-93839400 Weak transcription Left Ventricle heart
30 chr1:93833200-93839800 Weak transcription H1 Cell Line embryonic stem cell
31 chr1:93833200-93841200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr1:93833200-93841200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr1:93833200-93841400 Weak transcription Primary T helper cells fromperipheralblood blood
34 chr1:93833400-93839400 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr1:93833400-93839600 Weak transcription Fetal Muscle Trunk muscle
36 chr1:93833400-93840000 Weak transcription Primary hematopoietic stem cells short term culture blood
37 chr1:93833400-93840000 Weak transcription Fetal Muscle Leg muscle
38 chr1:93833400-93841000 Weak transcription Primary T cells fromperipheralblood blood
39 chr1:93833400-93841200 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr1:93833400-93841200 Weak transcription Fetal Intestine Large intestine
41 chr1:93833600-93839400 Weak transcription Fetal Intestine Small intestine
42 chr1:93833600-93839400 Weak transcription Thymus Thymus
43 chr1:93833600-93839600 Weak transcription Primary T cells from cord blood blood
44 chr1:93833600-93839800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr1:93833600-93839800 Weak transcription K562 blood
46 chr1:93833600-93840000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr1:93833600-93840800 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr1:93833800-93841400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr1:93834000-93839400 Weak transcription Placenta Placenta
50 chr1:93834200-93839400 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015