The 2.0 version of rSNPBase

Variant report

Variant rs6684908
Chromosome Location chr1:93753932-93753933
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93647000-93756400 Weak transcription Gastric stomach
2 chr1:93647200-93757600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr1:93692200-93787800 Weak transcription Placenta Amnion Placenta Amnion
4 chr1:93720000-93762000 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr1:93728600-93754800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr1:93728600-93764400 Weak transcription Psoas Muscle Psoas
7 chr1:93728600-93769400 Weak transcription Rectal Smooth Muscle rectum
8 chr1:93728600-93770400 Weak transcription HSMM muscle
9 chr1:93728800-93754800 Weak transcription Ovary ovary
10 chr1:93728800-93755000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr1:93728800-93755000 Weak transcription Left Ventricle heart
12 chr1:93728800-93755000 Weak transcription Stomach Smooth Muscle stomach
13 chr1:93728800-93778200 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:93729000-93790200 Weak transcription Osteobl bone
15 chr1:93729800-93754800 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr1:93729800-93763200 Weak transcription Pancreas Pancrea
17 chr1:93730000-93754400 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr1:93730400-93754600 Weak transcription Fetal Muscle Leg muscle
19 chr1:93731000-93765400 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr1:93731200-93787400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:93731800-93754200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:93731800-93754600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:93736400-93771200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr1:93739200-93755000 Weak transcription HSMMtube muscle
25 chr1:93739600-93754200 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr1:93739600-93766600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:93742000-93754400 Weak transcription Duodenum Mucosa Duodenum
28 chr1:93743600-93755400 Weak transcription Small Intestine intestine
29 chr1:93743600-93770200 Weak transcription Fetal Kidney kidney
30 chr1:93745800-93780200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr1:93746000-93755000 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr1:93746200-93754200 Weak transcription Fetal Lung lung
33 chr1:93746200-93754200 Weak transcription Fetal Muscle Trunk muscle
34 chr1:93746600-93789400 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr1:93746800-93780000 Weak transcription Aorta Aorta
36 chr1:93747800-93755000 Weak transcription Brain Anterior Caudate brain
37 chr1:93750800-93756800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr1:93751200-93761800 Weak transcription Spleen Spleen
39 chr1:93751400-93757200 Strong transcription Primary T cells from cord blood blood
40 chr1:93751600-93794600 Weak transcription Brain Substantia Nigra brain
41 chr1:93751800-93754200 Weak transcription GM12878-XiMat blood
42 chr1:93752000-93754200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:93752000-93756600 Weak transcription Esophagus oesophagus
44 chr1:93752400-93755200 Weak transcription NHLF lung
45 chr1:93752600-93755400 Strong transcription Primary B cells from cord blood blood
46 chr1:93752600-93756000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
47 chr1:93752600-93756000 Strong transcription Primary T cells fromperipheralblood blood
48 chr1:93752600-93756200 Strong transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:93752600-93756200 Strong transcription Fetal Stomach stomach
50 chr1:93752600-93757400 Weak transcription Brain Angular Gyrus brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015