The 2.0 version of rSNPBase

Variant report

Variant rs11164896
Chromosome Location chr1:93770334-93770335
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93692200-93787800 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:93728600-93770400 Weak transcription HSMM muscle
3 chr1:93728800-93778200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:93729000-93790200 Weak transcription Osteobl bone
5 chr1:93731200-93787400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:93736400-93771200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr1:93745800-93780200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr1:93746600-93789400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:93746800-93780000 Weak transcription Aorta Aorta
10 chr1:93751600-93794600 Weak transcription Brain Substantia Nigra brain
11 chr1:93753000-93778200 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr1:93753000-93803600 Weak transcription Adipose Nuclei Adipose
13 chr1:93753200-93806400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr1:93755400-93778600 Weak transcription Stomach Smooth Muscle stomach
15 chr1:93755400-93778800 Weak transcription Ovary ovary
16 chr1:93755400-93802600 Weak transcription Primary B cells from cord blood blood
17 chr1:93755400-93803200 Weak transcription Fetal Thymus thymus
18 chr1:93755600-93772800 Weak transcription GM12878-XiMat blood
19 chr1:93755600-93775200 Weak transcription Left Ventricle heart
20 chr1:93755600-93780200 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr1:93755600-93803400 Weak transcription Fetal Intestine Large intestine
22 chr1:93755600-93804200 Weak transcription Brain Anterior Caudate brain
23 chr1:93755800-93790200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:93755800-93801400 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr1:93756000-93778800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr1:93756000-93785600 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr1:93756000-93803800 Weak transcription Primary T cells fromperipheralblood blood
28 chr1:93756200-93770600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:93756200-93777000 Weak transcription Fetal Stomach stomach
30 chr1:93756200-93777400 Weak transcription Fetal Muscle Leg muscle
31 chr1:93756200-93777600 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr1:93756200-93782600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:93756400-93775800 Weak transcription Brain Hippocampus Middle brain
34 chr1:93762800-93772200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr1:93762800-93778200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:93765200-93782400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:93765800-93809800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr1:93766200-93770400 Weak transcription Fetal Intestine Small intestine
39 chr1:93767800-93801400 Weak transcription Primary hematopoietic stem cells blood
40 chr1:93768400-93770400 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr1:93768600-93770400 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr1:93768600-93770800 Weak transcription ES-WA7 Cell Line embryonic stem cell
43 chr1:93768600-93772400 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr1:93768600-93791600 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr1:93768600-93803000 Weak transcription Breast Myoepithelial Primary Cells Breast
46 chr1:93768800-93787400 Weak transcription Primary T cells from cord blood blood
47 chr1:93769800-93788200 Weak transcription Placenta Placenta
48 chr1:93770000-93770600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:93770200-93770400 Enhancers Brain Cingulate Gyrus brain
50 chr1:93770200-93770600 Enhancers HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015