Variant report

Variant rs11182292
Chromosome Location chr12:38493907-38493908
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:38493200-38494000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr12:38493200-38494000 Active TSS Primary T cells from cord blood blood
3 chr12:38493200-38494000 Active TSS HSMM muscle
4 chr12:38493200-38494200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
5 chr12:38493200-38494200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
6 chr12:38493200-38494200 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
7 chr12:38493200-38494200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
8 chr12:38493200-38494200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
9 chr12:38493200-38494200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr12:38493200-38494200 Active TSS HUVEC blood vessel
11 chr12:38493200-38494600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
12 chr12:38493400-38494000 Active TSS ES-WA7 Cell Line embryonic stem cell
13 chr12:38493400-38494000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr12:38493400-38494000 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr12:38493400-38494000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
16 chr12:38493400-38494000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr12:38493400-38494000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr12:38493400-38494000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr12:38493400-38494000 Flanking Bivalent TSS/Enh Breast Myoepithelial Primary Cells Breast
20 chr12:38493400-38494000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
21 chr12:38493400-38494000 Active TSS Primary B cells from cord blood blood
22 chr12:38493400-38494000 Active TSS Primary T helper cells fromperipheralblood blood
23 chr12:38493400-38494000 Active TSS Primary T killer memory cells from peripheral blood blood
24 chr12:38493400-38494000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr12:38493400-38494000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr12:38493400-38494000 Active TSS Muscle Satellite Cultured Cells --
27 chr12:38493400-38494000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
28 chr12:38493400-38494000 ZNF genes & repeats Adipose Nuclei Adipose
29 chr12:38493400-38494000 Active TSS Liver Liver
30 chr12:38493400-38494000 ZNF genes & repeats Brain Hippocampus Middle brain
31 chr12:38493400-38494000 ZNF genes & repeats Brain Inferior Temporal Lobe brain
32 chr12:38493400-38494000 ZNF genes & repeats Colonic Mucosa Colon
33 chr12:38493400-38494000 Active TSS Colon Smooth Muscle Colon
34 chr12:38493400-38494000 Active TSS Duodenum Smooth Muscle Duodenum
35 chr12:38493400-38494000 ZNF genes & repeats Esophagus oesophagus
36 chr12:38493400-38494000 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
37 chr12:38493400-38494000 Active TSS Fetal Kidney kidney
38 chr12:38493400-38494000 ZNF genes & repeats Fetal Lung lung
39 chr12:38493400-38494000 ZNF genes & repeats Fetal Muscle Trunk muscle
40 chr12:38493400-38494000 ZNF genes & repeats Fetal Muscle Leg muscle
41 chr12:38493400-38494000 ZNF genes & repeats Placenta Placenta
42 chr12:38493400-38494000 ZNF genes & repeats Fetal Stomach stomach
43 chr12:38493400-38494000 ZNF genes & repeats Fetal Thymus thymus
44 chr12:38493400-38494000 Bivalent/Poised TSS Left Ventricle heart
45 chr12:38493400-38494000 Active TSS Ovary ovary
46 chr12:38493400-38494000 Active TSS Rectal Mucosa Donor 29 rectum
47 chr12:38493400-38494000 Active TSS Rectal Mucosa Donor 31 rectum
48 chr12:38493400-38494000 Active TSS Rectal Smooth Muscle rectum
49 chr12:38493400-38494000 Active TSS Skeletal Muscle Male skeletal muscle
50 chr12:38493400-38494000 Active TSS Stomach Mucosa stomach

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