Variant report

Variant rs12310989
Chromosome Location chr12:38493434-38493435
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:38493200-38494000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr12:38493200-38494000 Active TSS Primary T cells from cord blood blood
3 chr12:38493200-38494000 Active TSS HSMM muscle
4 chr12:38493200-38494200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
5 chr12:38493200-38494200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
6 chr12:38493200-38494200 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
7 chr12:38493200-38494200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
8 chr12:38493200-38494200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
9 chr12:38493200-38494200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr12:38493200-38494200 Active TSS HUVEC blood vessel
11 chr12:38493200-38494600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
12 chr12:38493400-38493600 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr12:38493400-38493600 Bivalent/Poised TSS Primary T cells fromperipheralblood blood
14 chr12:38493400-38493800 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr12:38493400-38493800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
16 chr12:38493400-38493800 Bivalent/Poised TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr12:38493400-38493800 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
18 chr12:38493400-38493800 Active TSS Brain Angular Gyrus brain
19 chr12:38493400-38493800 Active TSS Brain Cingulate Gyrus brain
20 chr12:38493400-38493800 ZNF genes & repeats Brain Dorsolateral Prefrontal Cortex brain
21 chr12:38493400-38493800 ZNF genes & repeats Fetal Intestine Large intestine
22 chr12:38493400-38493800 Active TSS Gastric stomach
23 chr12:38493400-38493800 ZNF genes & repeats Pancreas Pancrea
24 chr12:38493400-38493800 Active TSS Psoas Muscle Psoas
25 chr12:38493400-38493800 ZNF genes & repeats Right Atrium heart
26 chr12:38493400-38493800 Active TSS Right Ventricle heart
27 chr12:38493400-38493800 Active TSS Skeletal Muscle Female skeletal muscle
28 chr12:38493400-38493800 ZNF genes & repeats Thymus Thymus
29 chr12:38493400-38493800 Active TSS HSMMtube muscle
30 chr12:38493400-38494000 Active TSS ES-WA7 Cell Line embryonic stem cell
31 chr12:38493400-38494000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr12:38493400-38494000 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr12:38493400-38494000 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
34 chr12:38493400-38494000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr12:38493400-38494000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr12:38493400-38494000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr12:38493400-38494000 Flanking Bivalent TSS/Enh Breast Myoepithelial Primary Cells Breast
38 chr12:38493400-38494000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
39 chr12:38493400-38494000 Active TSS Primary B cells from cord blood blood
40 chr12:38493400-38494000 Active TSS Primary T helper cells fromperipheralblood blood
41 chr12:38493400-38494000 Active TSS Primary T killer memory cells from peripheral blood blood
42 chr12:38493400-38494000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr12:38493400-38494000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr12:38493400-38494000 Active TSS Muscle Satellite Cultured Cells --
45 chr12:38493400-38494000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
46 chr12:38493400-38494000 ZNF genes & repeats Adipose Nuclei Adipose
47 chr12:38493400-38494000 Active TSS Liver Liver
48 chr12:38493400-38494000 ZNF genes & repeats Brain Hippocampus Middle brain
49 chr12:38493400-38494000 ZNF genes & repeats Brain Inferior Temporal Lobe brain
50 chr12:38493400-38494000 ZNF genes & repeats Colonic Mucosa Colon

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