Variant report

Variant	rs11186598
Chromosome Location	chr10:93283457-93283458
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11186548	1.00[CEU][hapmap];0.86[YRI][hapmap]
rs11186603	0.96[AFR][1000 genomes]
rs12244852	1.00[CEU][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.93[EUR][1000 genomes]
rs12257543	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs12263020	0.85[EUR][1000 genomes]
rs12265243	0.85[EUR][1000 genomes]
rs12266111	0.93[EUR][1000 genomes]
rs17106706	1.00[CEU][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];0.93[EUR][1000 genomes]
rs7071064	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs7081707	1.00[CEU][hapmap];0.83[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap]
rs7087338	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs7894994	1.00[CEU][hapmap]
rs7899549	0.86[EUR][1000 genomes]
rs7903943	1.00[CEU][hapmap]
rs7919792	1.00[CEU][hapmap];1.00[MEX][hapmap]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93244600-93284000	Weak transcription	Esophagus	oesophagus
2	chr10:93259000-93284400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr10:93263800-93288000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr10:93272200-93296000	Weak transcription	HSMMtube	muscle
5	chr10:93278200-93296000	Weak transcription	HSMM	muscle
6	chr10:93278400-93298400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr10:93280200-93285600	Weak transcription	Skeletal Muscle Male	skeletal muscle
8	chr10:93280200-93285600	Weak transcription	Spleen	Spleen
9	chr10:93280800-93285800	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr10:93280800-93287600	Weak transcription	Psoas Muscle	Psoas
11	chr10:93281600-93285200	Weak transcription	Liver	Liver
12	chr10:93281800-93285000	Weak transcription	Fetal Lung	lung
13	chr10:93281800-93285400	Weak transcription	H9 Cell Line	embryonic stem cell
14	chr10:93282000-93284400	Weak transcription	Pancreas	Pancrea
15	chr10:93283400-93284200	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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