Variant report

Variant	rs11186644
Chromosome Location	chr10:93412819-93412820
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:93407788..93410701-chr10:93411567..93414126,2	K562	blood:
2	chr10:93411332..93412973-chr10:93428669..93431138,2	MCF-7	breast:
3	chr10:93411652..93413648-chr10:93444195..93446402,2	MCF-7	breast:

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10881933	1.00[ASN][1000 genomes]
rs11186636	0.81[CEU][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186642	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186645	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186653	1.00[CEU][hapmap];0.95[YRI][hapmap];0.93[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186656	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12354682	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12356678	0.91[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12359574	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1341992	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4382814	0.83[YRI][hapmap]
rs4933680	0.81[CEU][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58528906	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60729272	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74149295	0.93[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93410400-93414000	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr10:93410800-93414000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr10:93411000-93413800	Enhancers	NHDF-Ad	bronchial
4	chr10:93411200-93414000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr10:93411200-93414000	Enhancers	Muscle Satellite Cultured Cells	--
6	chr10:93411400-93413600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr10:93411400-93413800	Enhancers	Hela-S3	cervix
8	chr10:93411400-93413800	Enhancers	HSMM	muscle
9	chr10:93411400-93413800	Enhancers	Osteobl	bone
10	chr10:93411400-93414000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr10:93411400-93414000	Enhancers	Placenta Amnion	Placenta Amnion
12	chr10:93411600-93413200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr10:93411600-93413600	Flanking Active TSS	A549	lung
14	chr10:93411600-93413800	Enhancers	NH-A	brain
15	chr10:93411600-93413800	Enhancers	NHLF	lung
16	chr10:93411800-93413200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr10:93411800-93413400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr10:93412000-93413800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr10:93412200-93413800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr10:93412200-93413800	Enhancers	Fetal Heart	heart
21	chr10:93412400-93413000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr10:93412400-93414000	Flanking Active TSS	NHEK	skin
23	chr10:93412600-93413600	Enhancers	Cortex derived primary cultured neurospheres	brain
24	chr10:93412600-93413600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr10:93412600-93413800	Flanking Active TSS	HMEC	breast
26	chr10:93412800-93413000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr10:93412800-93413200	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr10:93412800-93413200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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