Variant report

Variant	rs11187187
Chromosome Location	chr10:94595839-94595840
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:94595494..94597932-chr10:94606791..94609350,3	MCF-7	breast:
2	chr10:94590260..94593041-chr10:94593935..94595918,2	K562	blood:

Variant related genes	Relation type
ENSG00000138190	Chromatin interaction

rs_ID	r²[population]
rs10160103	1.00[AMR][1000 genomes]
rs11187230	1.00[AMR][1000 genomes]
rs11187239	1.00[AMR][1000 genomes]
rs12245143	1.00[AMR][1000 genomes]
rs12245568	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12249066	1.00[AMR][1000 genomes]
rs12253892	1.00[AMR][1000 genomes]
rs12255078	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12256603	1.00[AMR][1000 genomes]
rs12260134	1.00[AMR][1000 genomes]
rs12262000	1.00[AMR][1000 genomes]
rs12262557	1.00[AMR][1000 genomes]
rs12262584	1.00[ASW][hapmap];1.00[LWK][hapmap];0.87[MKK][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12269081	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12269377	1.00[AMR][1000 genomes]

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94589000-94598000	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr10:94589400-94599200	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr10:94591000-94598800	Weak transcription	Right Atrium	heart
4	chr10:94591600-94597000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr10:94591600-94602800	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr10:94591600-94602800	Weak transcription	Primary hematopoietic stem cells	blood
7	chr10:94592200-94605600	Weak transcription	Primary B cells from peripheral blood	blood
8	chr10:94592800-94596000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr10:94593000-94597200	Weak transcription	Primary T cells from cord blood	blood
10	chr10:94593000-94597200	Weak transcription	Placenta	Placenta
11	chr10:94593200-94596000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr10:94593200-94596200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
13	chr10:94593200-94597000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
14	chr10:94593400-94598600	Weak transcription	Lung	lung
15	chr10:94593800-94596400	Transcr. at gene 5' and 3'	HUVEC	blood vessel
16	chr10:94594000-94597800	Active TSS	Skeletal Muscle Male	skeletal muscle
17	chr10:94594000-94598000	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr10:94594200-94596400	Active TSS	Fetal Muscle Trunk	muscle
19	chr10:94594200-94596600	Active TSS	Fetal Muscle Leg	muscle
20	chr10:94594200-94596600	Active TSS	HSMMtube	muscle
21	chr10:94594400-94598600	Weak transcription	Adipose Nuclei	Adipose
22	chr10:94594600-94596600	Weak transcription	K562	blood
23	chr10:94594600-94599000	Weak transcription	Ovary	ovary
24	chr10:94594800-94596000	Enhancers	HSMM	muscle
25	chr10:94595200-94596800	Enhancers	iPS-15b Cell Line	embryonic stem cell
26	chr10:94595200-94597000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
27	chr10:94595400-94598800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr10:94595400-94599000	Weak transcription	Osteobl	bone
29	chr10:94595400-94599200	Weak transcription	A549	lung
30	chr10:94595600-94596000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
31	chr10:94595600-94599000	Weak transcription	Hela-S3	cervix
32	chr10:94595600-94599000	Weak transcription	NHLF	lung
33	chr10:94595800-94596000	Enhancers	HUES48 Cell Line	embryonic stem cell
34	chr10:94595800-94596000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr10:94595800-94596000	Flanking Active TSS	Psoas Muscle	Psoas

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