The 2.0 version of rSNPBase

Variant report

Variant rs11188334
Chromosome Location chr10:97254594-97254595
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97239600-97260800 Weak transcription Brain Germinal Matrix brain
2 chr10:97241000-97260600 Weak transcription Fetal Muscle Trunk muscle
3 chr10:97241600-97260400 Weak transcription Fetal Brain Male brain
4 chr10:97241600-97260600 Weak transcription Fetal Stomach stomach
5 chr10:97241800-97256400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr10:97242000-97256400 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr10:97242800-97256000 Weak transcription Fetal Muscle Leg muscle
8 chr10:97245400-97259200 Weak transcription Brain Substantia Nigra brain
9 chr10:97245400-97264600 Weak transcription Ovary ovary
10 chr10:97245800-97259400 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr10:97246200-97256600 Weak transcription Brain Cingulate Gyrus brain
12 chr10:97246400-97256000 Weak transcription HSMMtube muscle
13 chr10:97247400-97259800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr10:97249400-97261200 Weak transcription Fetal Brain Female brain
15 chr10:97249800-97274000 Weak transcription Spleen Spleen
16 chr10:97250000-97258800 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr10:97251200-97268200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr10:97252200-97254600 Enhancers Brain Angular Gyrus brain
19 chr10:97252200-97254600 Enhancers Gastric stomach
20 chr10:97252200-97254600 Enhancers Pancreas Pancrea
21 chr10:97252200-97255600 Enhancers Fetal Heart heart
22 chr10:97252200-97255600 Enhancers Left Ventricle heart
23 chr10:97252400-97254600 Enhancers Psoas Muscle Psoas
24 chr10:97252400-97254600 Genic enhancers Stomach Smooth Muscle stomach
25 chr10:97252400-97255200 Enhancers K562 blood
26 chr10:97252400-97262000 Weak transcription Fetal Lung lung
27 chr10:97252600-97254800 Enhancers Colon Smooth Muscle Colon
28 chr10:97252600-97259200 Weak transcription Liver Liver
29 chr10:97253200-97254600 Enhancers Rectal Smooth Muscle rectum
30 chr10:97253200-97254800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr10:97253400-97255800 Enhancers Brain Anterior Caudate brain
32 chr10:97253400-97261200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr10:97253600-97256600 Weak transcription Brain Hippocampus Middle brain
34 chr10:97253800-97256200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr10:97253800-97257800 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr10:97253800-97258400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr10:97253800-97258400 Weak transcription HUVEC blood vessel
38 chr10:97253800-97258800 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr10:97254000-97254600 Enhancers H1 Cell Line embryonic stem cell
40 chr10:97254000-97265000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr10:97254200-97254600 Enhancers H9 Cell Line embryonic stem cell
42 chr10:97254200-97256400 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr10:97254200-97256800 Weak transcription Placenta Placenta
44 chr10:97254200-97257000 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr10:97254200-97257600 Weak transcription Fetal Intestine Large intestine
46 chr10:97254200-97259200 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr10:97254200-97261000 Weak transcription Stomach Mucosa stomach
48 chr10:97254400-97254600 Enhancers Aorta Aorta
49 chr10:97254400-97256400 Weak transcription Brain Inferior Temporal Lobe brain
50 chr10:97254400-97256400 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015