The 2.0 version of rSNPBase

Variant report

Variant rs11196946
Chromosome Location chr10:116601142-116601143
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116582800-116604400 Weak transcription Esophagus oesophagus
2 chr10:116583000-116617600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr10:116583200-116616800 Weak transcription K562 blood
4 chr10:116583800-116601600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr10:116584600-116608400 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr10:116586000-116604800 Weak transcription Fetal Heart heart
7 chr10:116588800-116605600 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr10:116589200-116609000 Strong transcription Primary hematopoietic stem cells short term culture blood
9 chr10:116589400-116602800 Weak transcription Gastric stomach
10 chr10:116589600-116602600 Weak transcription Pancreas Pancrea
11 chr10:116589600-116609000 Weak transcription H9 Cell Line embryonic stem cell
12 chr10:116589600-116626600 Weak transcription Stomach Mucosa stomach
13 chr10:116589600-116640600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr10:116590000-116604400 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr10:116590200-116614400 Strong transcription HSMM muscle
16 chr10:116590400-116609800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr10:116590800-116609400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr10:116590800-116609600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr10:116590800-116613200 Strong transcription Primary T cells fromperipheralblood blood
20 chr10:116590800-116614800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr10:116590800-116616600 Strong transcription Primary T regulatory cells fromperipheralblood blood
22 chr10:116590800-116624400 Strong transcription Dnd41 blood
23 chr10:116590800-116625600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr10:116590800-116626400 Strong transcription Monocytes-CD14+_RO01746 blood
25 chr10:116591000-116601200 Strong transcription Fetal Lung lung
26 chr10:116591000-116603400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr10:116591000-116606800 Strong transcription Liver Liver
28 chr10:116591000-116610800 Strong transcription Fetal Intestine Large intestine
29 chr10:116591000-116616000 Strong transcription Placenta Placenta
30 chr10:116591000-116619400 Strong transcription Fetal Muscle Leg muscle
31 chr10:116591000-116624800 Strong transcription Primary monocytes fromperipheralblood blood
32 chr10:116591000-116626600 Strong transcription Primary neutrophils fromperipheralblood blood
33 chr10:116591200-116602800 Weak transcription Right Ventricle heart
34 chr10:116591200-116602800 Weak transcription Small Intestine intestine
35 chr10:116591200-116610600 Strong transcription Primary T helper cells PMA-I stimulated --
36 chr10:116591400-116602800 Weak transcription Aorta Aorta
37 chr10:116591800-116614400 Strong transcription Osteobl bone
38 chr10:116592400-116611000 Strong transcription Fetal Muscle Trunk muscle
39 chr10:116592400-116612400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr10:116592400-116613200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr10:116592400-116614000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr10:116592400-116625200 Strong transcription Fetal Adrenal Gland Adrenal Gland
43 chr10:116592600-116616600 Strong transcription Primary T helper cells fromperipheralblood blood
44 chr10:116592800-116601400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr10:116592800-116612400 Strong transcription Primary T cells from cord blood blood
46 chr10:116593000-116613000 Strong transcription Fetal Thymus thymus
47 chr10:116593000-116616800 Strong transcription Duodenum Smooth Muscle Duodenum
48 chr10:116593200-116604200 Weak transcription Psoas Muscle Psoas
49 chr10:116593200-116613600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr10:116594400-116609000 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015