The 2.0 version of rSNPBase

Variant report

Variant rs11196955
Chromosome Location chr10:116620082-116620083
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116589600-116626600 Weak transcription Stomach Mucosa stomach
2 chr10:116589600-116640600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr10:116590800-116624400 Strong transcription Dnd41 blood
4 chr10:116590800-116625600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr10:116590800-116626400 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr10:116591000-116624800 Strong transcription Primary monocytes fromperipheralblood blood
7 chr10:116591000-116626600 Strong transcription Primary neutrophils fromperipheralblood blood
8 chr10:116592400-116625200 Strong transcription Fetal Adrenal Gland Adrenal Gland
9 chr10:116595800-116623000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr10:116602600-116624800 Strong transcription Duodenum Mucosa Duodenum
11 chr10:116604800-116627200 Weak transcription Small Intestine intestine
12 chr10:116606200-116624200 Weak transcription Gastric stomach
13 chr10:116609400-116623400 Weak transcription H9 Cell Line embryonic stem cell
14 chr10:116609600-116634800 Weak transcription Spleen Spleen
15 chr10:116609600-116639400 Weak transcription Pancreas Pancrea
16 chr10:116610200-116625000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr10:116610200-116625000 Weak transcription Colonic Mucosa Colon
18 chr10:116610200-116625400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr10:116610200-116625600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr10:116610200-116634600 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr10:116610400-116628000 Weak transcription Esophagus oesophagus
22 chr10:116610600-116628000 Weak transcription Brain Inferior Temporal Lobe brain
23 chr10:116611400-116624600 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr10:116611600-116641000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr10:116612400-116625800 Weak transcription Brain Cingulate Gyrus brain
26 chr10:116612800-116625600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr10:116612800-116626600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr10:116613600-116625400 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr10:116614000-116625000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr10:116614000-116626200 Strong transcription Primary hematopoietic stem cells blood
31 chr10:116614400-116624400 Strong transcription HUES6 Cell Line embryonic stem cell
32 chr10:116614400-116624600 Strong transcription HUES64 Cell Line embryonic stem cell
33 chr10:116614400-116624800 Strong transcription Skeletal Muscle Female skeletal muscle
34 chr10:116614400-116626200 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr10:116614600-116624000 Strong transcription Primary B cells from peripheral blood blood
36 chr10:116614800-116628400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr10:116616200-116621000 Weak transcription H1 Cell Line embryonic stem cell
38 chr10:116616200-116624400 Strong transcription HUES48 Cell Line embryonic stem cell
39 chr10:116616600-116620600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr10:116616600-116621000 Weak transcription Brain Hippocampus Middle brain
41 chr10:116616800-116621000 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr10:116616800-116624400 Weak transcription Brain Angular Gyrus brain
43 chr10:116616800-116624400 Weak transcription Fetal Heart heart
44 chr10:116616800-116625400 Strong transcription Primary T regulatory cells fromperipheralblood blood
45 chr10:116616800-116625400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr10:116616800-116626400 Weak transcription Brain Substantia Nigra brain
47 chr10:116617000-116621400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr10:116617000-116627400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr10:116617000-116630200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr10:116617200-116620600 Weak transcription iPS-20b Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015