Variant report

Variant rs11206648
Chromosome Location chr1:56106600-56106601
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56099000-56106600 Weak transcription Ovary ovary
2 chr1:56100600-56106600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr1:56100800-56106600 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr1:56101800-56106600 Weak transcription Fetal Lung lung
5 chr1:56103400-56107000 Weak transcription Gastric stomach
6 chr1:56104600-56107000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:56104600-56107200 Enhancers NHEK skin
8 chr1:56104800-56106600 Weak transcription Fetal Heart heart
9 chr1:56104800-56106600 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr1:56105000-56106600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:56105000-56107400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:56105200-56107400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:56105600-56106600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr1:56105600-56106600 Enhancers Osteobl bone
15 chr1:56105800-56106600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:56105800-56106600 Enhancers Fetal Muscle Leg muscle
17 chr1:56105800-56107400 Enhancers Fetal Stomach stomach
18 chr1:56106000-56106600 Enhancers Muscle Satellite Cultured Cells --
19 chr1:56106000-56106600 Enhancers Aorta Aorta
20 chr1:56106000-56106600 Weak transcription Fetal Kidney kidney
21 chr1:56106000-56107600 Enhancers NHLF lung
22 chr1:56106200-56106600 Weak transcription Placenta Amnion Placenta Amnion
23 chr1:56106400-56106600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:56106400-56106600 Enhancers Primary monocytes fromperipheralblood blood
25 chr1:56106400-56106600 Enhancers Primary B cells from peripheral blood blood
26 chr1:56106400-56106600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:56106400-56106600 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:56106400-56106600 Enhancers Brain Inferior Temporal Lobe brain
29 chr1:56106400-56106600 Flanking Active TSS Duodenum Smooth Muscle Duodenum
30 chr1:56106400-56106600 Enhancers Psoas Muscle Psoas
31 chr1:56106400-56106600 Enhancers HSMMtube muscle
32 chr1:56106400-56106600 Enhancers HUVEC blood vessel
33 chr1:56106400-56106600 Enhancers NHDF-Ad bronchial
34 chr1:56106400-56106800 Flanking Active TSS Brain Hippocampus Middle brain
35 chr1:56106400-56107000 Flanking Active TSS HMEC breast
36 chr1:56106400-56107200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
37 chr1:56106400-56107400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr1:56106400-56107400 Active TSS Stomach Smooth Muscle stomach
39 chr1:56106400-56107400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
40 chr1:56106600-56106800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:56106600-56106800 Enhancers Primary Natural Killer cells fromperipheralblood blood
42 chr1:56106600-56106800 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr1:56106600-56106800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:56106600-56106800 Flanking Active TSS Adipose Nuclei Adipose
45 chr1:56106600-56106800 Flanking Active TSS Ovary ovary
46 chr1:56106600-56106800 Active TSS Skeletal Muscle Male skeletal muscle
47 chr1:56106600-56106800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
48 chr1:56106600-56106800 Active TSS GM12878-XiMat blood
49 chr1:56106600-56106800 Active TSS HSMM muscle
50 chr1:56106600-56107000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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