Variant report

Variant	rs11209025
Chromosome Location	chr1:67693022-67693023
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10489628	0.87[ASN][1000 genomes]
rs10489629	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10789228	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11209023	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11465802	0.87[ASN][1000 genomes]
rs12030107	0.81[ASN][1000 genomes]
rs12030948	0.81[ASN][1000 genomes]
rs12031203	0.81[ASN][1000 genomes]
rs2201841	0.81[ASN][1000 genomes]
rs35427944	0.89[ASN][1000 genomes]
rs6686950	0.81[ASN][1000 genomes]
rs7518660	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7523955	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7543633	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:67691000-67693200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
2	chr1:67692400-67693400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr1:67692600-67693200	Enhancers	HMEC	breast
4	chr1:67692600-67693400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr1:67692600-67693600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr1:67692600-67693600	Enhancers	NHEK	skin
7	chr1:67692600-67695000	Weak transcription	Esophagus	oesophagus
8	chr1:67692800-67702000	Weak transcription	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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