Variant report

Variant	rs7543633
Chromosome Location	chr1:67691772-67691773
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10489628	0.89[ASN][1000 genomes]
rs10489629	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10789228	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11209023	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11209025	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11465802	0.89[ASN][1000 genomes]
rs12030107	0.82[ASN][1000 genomes]
rs12030948	0.82[ASN][1000 genomes]
rs12031203	0.82[ASN][1000 genomes]
rs1343152	0.81[ASN][1000 genomes]
rs2201841	0.82[ASN][1000 genomes]
rs35427944	0.90[ASN][1000 genomes]
rs6686950	0.82[ASN][1000 genomes]
rs7518660	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7523955	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:67689800-67692400	Enhancers	Brain Germinal Matrix	brain
2	chr1:67690600-67692800	Strong transcription	K562	blood
3	chr1:67691000-67691800	Enhancers	Fetal Kidney	kidney
4	chr1:67691000-67693200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
5	chr1:67691200-67692600	Enhancers	Esophagus	oesophagus
6	chr1:67691200-67692800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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